RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 SAMD8Q96LT4 415 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 SLC6A15Q9H2J7 730 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 FKRPQ9H9S5 495 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 PAK1IP1Q9NWT1 392 aaPredicted RBP14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 H2AFY2Q9P0M6 372 aaPredicted RBP14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 PPP4R1LQ9P1A2 415 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 ERVK-18Q9QC07 812 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 SPRR3Q9UBC9 169 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 ZNF229Q9UJW7 825 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 WIF1Q9Y5W5 379 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 HEATR5AQ86XA9 2040 aa14.79□□□□□ -0.04
PDLIM1-201ENST00000329399 ITPR2Q14571 2701 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 TRAV36DV7A0A075B6V5 113 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 A0A087WZY1 265 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 A8MVM7 634 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 ZNF99A8MXY4 864 aaPredicted RBP14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 KDM4EB2RXH2 506 aaPredicted RBP14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 NPIPA2E9PIF3 369 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 NPIPA3F8WFD2 350 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 BHLHE40O14503 412 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 IMPA2O14732 288 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 ENTPD6O75354 484 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 HIST1H2ABP04908 130 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 IGFBP1P08833 259 aaPredicted RBP14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 HK1P19367 917 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 PTGS2P35354 604 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 SLC10A1Q14973 349 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 QPRTQ15274 297 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 SYT14P1Q58G82 188 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 SYT6Q5T7P8 510 aaPredicted RBP14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 AHSA2Q719I0 299 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 HIST3H2AQ7L7L0 130 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 OR5M9Q8NGP3 310 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 OR13F1Q8NGS4 319 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 HIST1H2ACQ93077 130 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 CCDC120Q96HB5 630 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 SH3YL1Q96HL8 342 aaPredicted RBP14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 LRR1Q96L50 414 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 IL4I1Q96RQ9 567 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 GPX7Q96SL4 187 aaPredicted RBP14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 RBM38Q9H0Z9 239 aaKnown RBP14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 PTGES2Q9H7Z7 377 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 NANSQ9NR45 359 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 CMC2Q9NRP2 79 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 KLHL21Q9UJP4 597 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 OSGIN1Q9UJX0 560 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 DCHS2Q6V1P9 2916 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 NOTCH2Q04721 2471 aa14.78□□□□□ -0.04
PDLIM1-201ENST00000329399 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 A0A1B0GVC2 190 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 KPNA4O00629 521 aaPredicted RBP14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 ARPC3O15145 178 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 ZNF208O43345 1280 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 PRKYO43930 277 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 NOL3O60936 208 aaKnown RBP14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 ABOP16442 354 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 PAICSP22234 425 aaKnown RBP14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 DCKP27707 260 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 ADH6P28332 368 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 EIF1P41567 113 aaKnown RBP14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 TMBIM6P55061 237 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 RPS4XP62701 263 aaKnown RBP14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 ADORA2A-AS1P86434 159 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 ST3GAL4Q11206 333 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 PMS2P3Q13401 168 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 RAB39AQ14964 217 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 ZNF74Q16587 644 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 UBE2UQ5VVX9 321 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 TIGD3Q6B0B8 471 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 GTF2IRD2BQ6EKJ0 949 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 GTF2IRD2Q86UP8 949 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 ANKK1Q8NFD2 765 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 FAM57AQ8TBR7 257 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 TMEM80Q96HE8 168 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 MRGPRX4Q96LA9 322 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 ZNF582Q96NG8 517 aaPredicted RBP14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 IFT27Q9BW83 186 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 ACOT13Q9NPJ3 140 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 RSL24D1Q9UHA3 163 aaKnown RBP14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 FBXL2Q9UKC9 423 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 BOKQ9UMX3 212 aaPredicted RBP14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 HIF3AQ9Y2N7 669 aa14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 SPIN1Q9Y657 262 aaPredicted RBP14.77□□□□□ -0.04
PDLIM1-201ENST00000329399 IGKV1D-42A0A075B6H8 117 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 TMED7-TICAM2A0A0A6YYA0 188 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 RIIAD1A6NNX1 92 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 ACOT7O00154 380 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 TRMUO75648 421 aaKnown RBP14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 SNX4O95219 450 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 COL8A1P27658 744 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 ZNF41P51814 821 aaPredicted RBP14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 RBPJQ06330 500 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 NEDD8Q15843 81 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 CLEC12AQ5QGZ9 265 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 AADACL4Q5VUY2 407 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 CD163Q86VB7 1156 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 IQCF1Q8N6M8 205 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 OR13C2Q8NGS9 318 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 OR4Q3Q8NH05 313 aa14.76□□□□□ -0.05
PDLIM1-201ENST00000329399 TMEM41AQ96HV5 264 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms