RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 RENP00797 406 aa20.33■□□□□ 0.85
PNKP-201ENST00000322344 IL12BP29460 328 aa20.33■□□□□ 0.85
PNKP-201ENST00000322344 NXPH1P58417 271 aa20.33■□□□□ 0.85
PNKP-201ENST00000322344 KCNAB1Q14722 419 aa20.33■□□□□ 0.85
PNKP-201ENST00000322344 TIGD4Q8IY51 512 aa20.33■□□□□ 0.85
PNKP-201ENST00000322344 ZNF511Q8NB15 262 aa20.33■□□□□ 0.85
PNKP-201ENST00000322344 GRPEL2Q8TAA5 225 aa20.33■□□□□ 0.85
PNKP-201ENST00000322344 ZFP3Q96NJ6 502 aa20.33■□□□□ 0.85
PNKP-201ENST00000322344 DERL3Q96Q80 235 aa20.33■□□□□ 0.85
PNKP-201ENST00000322344 A0A1W2PQD3 144 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 FAM171A2A8MVW0 826 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 ICOSLGO75144 302 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 MAPK3P27361 379 aaPredicted RBP20.32■□□□□ 0.84
PNKP-201ENST00000322344 SRP9P49458 86 aaKnown RBP20.32■□□□□ 0.84
PNKP-201ENST00000322344 NANOS3P60323 173 aaKnown RBP20.32■□□□□ 0.84
PNKP-201ENST00000322344 DGCR2P98153 550 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 SMAD4Q13485 552 aaKnown RBP20.32■□□□□ 0.84
PNKP-201ENST00000322344 DYRK1AQ13627 763 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 HLA-DQA1Q5Y7H0 255 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 CDC20BQ86Y33 519 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 SIAH3Q8IW03 269 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 KTI12Q96EK9 354 aaPredicted RBP20.32■□□□□ 0.84
PNKP-201ENST00000322344 GAL3ST4Q96RP7 486 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 PHF7Q9BWX1 381 aaPredicted RBP20.32■□□□□ 0.84
PNKP-201ENST00000322344 MRPS7Q9Y2R9 242 aaKnown RBP20.32■□□□□ 0.84
PNKP-201ENST00000322344 TCRBV16S1A1N1A0A5B0 115 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 IFITM5A6NNB3 132 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 TO15178 435 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 MBTPS2O43462 519 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 EIF4E2O60573 245 aaKnown RBP20.32■□□□□ 0.84
PNKP-201ENST00000322344 ZFPL1O95159 310 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 CD3GP09693 182 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 GRPRP30550 384 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 SNAP47Q5SQN1 464 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 SLC22A10Q63ZE4 541 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 SMIM4Q8WVI0 70 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 DAZLQ92904 295 aaKnown RBP20.32■□□□□ 0.84
PNKP-201ENST00000322344 RNF166Q96A37 237 aaPredicted RBP20.32■□□□□ 0.84
PNKP-201ENST00000322344 SCMH1Q96GD3 660 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 TSPAN32Q96QS1 320 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 SMAD5Q99717 465 aaKnown RBP20.32■□□□□ 0.84
PNKP-201ENST00000322344 NUDT9Q9BW91 350 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 SLITRK2Q9H156 845 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 ZNF275Q9NSD4 429 aaPredicted RBP20.32■□□□□ 0.84
PNKP-201ENST00000322344 AKAP7Q9P0M2 348 aaPredicted RBP20.32■□□□□ 0.84
PNKP-201ENST00000322344 RNF215Q9Y6U7 377 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 THADAQ6YHU6 1953 aa20.32■□□□□ 0.84
PNKP-201ENST00000322344 A0A0A6YYJ9 748 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 TMEM72A0PK05 275 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 PRR32B1ATL7 298 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 IDSB3KWA1 339 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 CDC40O60508 579 aaKnown RBP eCLIP20.31■□□□□ 0.84
PNKP-201ENST00000322344 TCRBP04435 133 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 F13BP05160 661 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 POU3F3P20264 500 aaPredicted RBP20.31■□□□□ 0.84
PNKP-201ENST00000322344 RAG2P55895 527 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 ZNF117Q03924 483 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 ALKBH1Q13686 389 aaKnown RBP20.31■□□□□ 0.84
PNKP-201ENST00000322344 EBPQ15125 230 aaKnown RBP20.31■□□□□ 0.84
PNKP-201ENST00000322344 MESTQ5EB52 335 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 BCL2L15Q5TBC7 163 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.31■□□□□ 0.84
PNKP-201ENST00000322344 RGP1Q92546 391 aaPredicted RBP20.31■□□□□ 0.84
PNKP-201ENST00000322344 TSSK2Q96PF2 358 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 MED28Q9H204 178 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 HEATR5AQ86XA9 2040 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 ACOD1A6NK06 481 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 HSPB2A8KAH6 182 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 UPK3AO75631 287 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 FBLP22087 321 aaKnown RBP20.31■□□□□ 0.84
PNKP-201ENST00000322344 CXCR1P25024 350 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 RPL6Q02878 288 aaKnown RBP20.31■□□□□ 0.84
PNKP-201ENST00000322344 HSPB2Q16082 182 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 Q499Y3 187 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 HSD17B8Q92506 261 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 TAAR8Q969N4 342 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 SRA1Q9HD15 236 aaKnown RBP20.31■□□□□ 0.84
PNKP-201ENST00000322344 NUDT15Q9NV35 164 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 MRM2Q9UI43 246 aaKnown RBP20.31■□□□□ 0.84
PNKP-201ENST00000322344 TMEM14AQ9Y6G1 99 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 V9GY05 133 aa20.31■□□□□ 0.84
PNKP-201ENST00000322344 TRAV36DV7A0A075B6V5 113 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 C4orf47A7E2U8 309 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 PHYHO14832 338 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 HCRTR2O43614 444 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 TSPAN2O60636 221 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 ZNF432O94892 652 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 ATXN8OSP0DMR3 200 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 OR8G3PP0DMU2 310 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 LIPNQ5VXI9 398 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 PLXDC1Q8IUK5 500 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 PRR22Q8IZ63 422 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 TDHQ8IZJ6 230 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 CMTM4Q8IZR5 234 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 OR5AK2Q8NH90 309 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 MAP6Q96JE9 813 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 KLHL15Q96M94 604 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 OR2M2Q96R28 347 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 GFI1Q99684 422 aa20.3■□□□□ 0.84
PNKP-201ENST00000322344 GHITMQ9H3K2 345 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms