RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PCNPQ8WW12 178 aaKnown RBP15.87■□□□□ 0.13
COL9A1-201ENST00000320755 ULBP3Q9BZM4 244 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 ANKRD10Q9NXR5 420 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 SCDO00767 359 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 RAD1O60671 282 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 SDC3O75056 442 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 HPXP02790 462 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 MAS1P04201 325 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 UBL4AP11441 157 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 ANXA3P12429 323 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 CD1CP29017 333 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 CAPZA2P47755 286 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 LTBQ06643 244 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 FUT7Q11130 342 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 UBE2NLQ5JXB2 153 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 WBP2NLQ6ICG8 309 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 LUZP2Q86TE4 346 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 OR6N2Q8NGY6 317 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 HAVCR2Q8TDQ0 301 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 THEM6Q8WUY1 208 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 TSLPQ969D9 159 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 TCF7L1Q9HCS4 588 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 GRHPRQ9UBQ7 328 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 ABCA7Q8IZY2 2146 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 KHDRBS3O75525 346 aaKnown RBP15.86■□□□□ 0.13
COL9A1-201ENST00000320755 NSA2O95478 260 aaKnown RBP15.86■□□□□ 0.13
COL9A1-201ENST00000320755 BLKP51451 505 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 RPS15P62841 145 aaKnown RBP15.86■□□□□ 0.13
COL9A1-201ENST00000320755 ZNF74Q16587 644 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 GSG1Q2KHT4 349 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 C1QL3Q5VWW1 255 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 DPY19L4Q7Z388 723 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 PIAS4Q8N2W9 510 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-201ENST00000320755 LPAR4Q99677 370 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 NKX3-1Q99801 234 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-201ENST00000320755 CHIAQ9BZP6 476 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 NMNAT2Q9BZQ4 307 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 UBQLN4Q9NRR5 601 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 GTF2A1LQ9UNN4 478 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 V9GY05 133 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-201ENST00000320755 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-201ENST00000320755 C7orf66A4D0T2 115 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 ZNF593O00488 134 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-201ENST00000320755 NDUFB5O43674 189 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 CD14P08571 375 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 FAM199XQ6PEV8 388 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-201ENST00000320755 FAM220AQ7Z4H9 259 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 SYNPRQ8TBG9 265 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 ADAMTS14Q8WXS8 1223 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 SLC25A36Q96CQ1 311 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 MRPL48Q96GC5 212 aaKnown RBP15.86■□□□□ 0.13
COL9A1-201ENST00000320755 TCTN2Q96GX1 697 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 SLX1AQ9BQ83 275 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 WDR76Q9H967 626 aa15.86■□□□□ 0.13
COL9A1-201ENST00000320755 DHCR7Q9UBM7 475 aaKnown RBP15.86■□□□□ 0.13
COL9A1-201ENST00000320755 PLGP00747 810 aaPredicted RBP15.85■□□□□ 0.13
COL9A1-201ENST00000320755 TACR3P29371 465 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 LTBRP36941 435 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 EGR4Q05215 589 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 RPL18Q07020 188 aaKnown RBP15.85■□□□□ 0.13
COL9A1-201ENST00000320755 KLF9Q13886 244 aaPredicted RBP15.85■□□□□ 0.13
COL9A1-201ENST00000320755 CCINQ13939 588 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 DEFB133Q30KQ1 61 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 CREB3L2Q70SY1 520 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 CMIPQ8IY22 773 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 OR10AC1Q8NH08 325 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 SMIM4Q8WVI0 70 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 SLC25A38Q96DW6 304 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 RTN4RQ9BZR6 473 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 ZFP64Q9NPA5 681 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 CHURC1-FNTBB4DL54 471 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 HCRTR2O43614 444 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 UTS2O95399 124 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 MST1P26927 711 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 FNTBP49356 437 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 SLC35F3Q8IY50 421 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 ZNF527Q8NB42 609 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 OR5AK2Q8NH90 309 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 SYT4Q9H2B2 425 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 MMP25Q9NPA2 562 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 MRM2Q9UI43 246 aaKnown RBP15.85■□□□□ 0.13
COL9A1-201ENST00000320755 LAMP5Q9UJQ1 280 aa15.85■□□□□ 0.13
COL9A1-201ENST00000320755 LRP4O75096 1905 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 GPRIN2O60269 458 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 HLA-DQA2P01906 255 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 VEGFCP49767 419 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 RPS4XP62701 263 aaKnown RBP15.84■□□□□ 0.13
COL9A1-201ENST00000320755 SLC35D3Q5M8T2 416 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 ATG4DQ86TL0 474 aaPredicted RBP15.84■□□□□ 0.13
COL9A1-201ENST00000320755 OR2M2Q96R28 347 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.84■□□□□ 0.13
COL9A1-201ENST00000320755 C8orf33Q9H7E9 229 aaPredicted RBP15.84■□□□□ 0.13
COL9A1-201ENST00000320755 EVA1AQ9H8M9 152 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 FRRS1LQ9P0K9 344 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 PRODH2Q9UF12 536 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 FKBP7Q9Y680 259 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 AIPO00170 330 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 ZNF264O43296 627 aa15.84■□□□□ 0.13
COL9A1-201ENST00000320755 HIST1H2ABP04908 130 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms