RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 SUCNR1Q9BXA5 334 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 CARS2Q9HA77 564 aaKnown RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 TIMM22Q9Y584 194 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 TCTAP57738 103 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SCGB2B2Q4G0G5 96 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 FAM219AQ8IW50 185 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ZDHHC22Q8N966 263 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 OR14L1PQ8NHC6 308 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PSMF1Q92530 271 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 FN3KRPQ9HA64 309 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 OBP2BQ9NPH6 170 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 MYOFQ9NZM1 2061 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 TSPAN11A1L157 253 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PRAMEF27A3QJZ7 478 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PRAMEF25A6NGN4 478 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 XRCC3O43542 346 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PRAMEF4O60810 478 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 TOX4O94842 621 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 MBPP02686 304 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 ZNF26P17031 533 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 DIO3P55073 304 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 IHHQ14623 411 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 NRN1LQ496H8 165 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PRAMEF9Q5VWM5 478 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 GCNT2Q8N0V5 402 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 OR4K5Q8NGD3 323 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 C16orf78Q8WTQ4 265 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ANAPC16Q96DE5 110 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SGPP1Q9BX95 441 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SFTPCP11686 197 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 MMP9P14780 707 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 AK4P27144 223 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 TNFRSF17Q02223 184 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 RUNX3Q13761 415 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 FAM111BQ6SJ93 734 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 CADM4Q8NFZ8 388 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 KATNB1Q9BVA0 655 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SLC17A9Q9BYT1 436 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 C11orf16Q9NQ32 467 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 NUP210Q8TEM1 1887 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 MSTNO14793 375 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 CHRM5P08912 532 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 HOXA11P31270 313 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 SNCAP37840 140 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PER3P56645 1201 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 RAB38P57729 211 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ENTPD8Q5MY95 495 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 MEPCEQ7L2J0 689 aaKnown RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 DPY19L4Q7Z388 723 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 NRMQ8IXM6 262 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ZNF251Q9BRH9 671 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ARHGAP9Q9BRR9 750 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 C14orf119Q9NWQ9 140 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 A0A0G2JN53 185 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 FAM166BA8MTA8 275 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PPP5D1E7EU14 171 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 MPDU1O75352 247 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 TIMP1P01033 207 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 POLR2CP19387 275 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 PTGER4P35408 488 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 RAB9AP51151 201 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 HMGA2P52926 109 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 EMX1Q04741 257 aaPredicted RBP3.73□□□□□ -1.81
USH2A-201ENST00000307340 DOK3Q7L591 496 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 TMPRSS12Q86WS5 348 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 WDR31Q8NA23 367 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SLC30A7Q8NEW0 376 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 OR1E3Q8WZA6 343 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SMOQ99835 787 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 IL23AQ9NPF7 189 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 CYSLTR2Q9NS75 346 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 NDRG3Q9UGV2 375 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 RIPK3Q9Y572 518 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 NIPSNAP2O75323 286 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 FURINP09958 794 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ARNTP27540 789 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PNLIPRP2P54317 469 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 GDF10P55107 478 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 MC2RQ01718 297 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 BNIP3Q12983 259 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 SLC35D2Q76EJ3 337 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 LILRB2Q8N423 598 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 TSLPQ969D9 159 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ENKD1Q9H0I2 346 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 ASH2LQ9UBL3 628 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 FREM3P0C091 2139 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 OR8U9P0C7N5 309 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PGA4P0DJD7 388 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PGA5P0DJD9 388 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 KLRK1P26718 216 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 DUSP1P28562 367 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 PYCR1P32322 319 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 EML3Q32P44 896 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 GTDC1Q4AE62 458 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 FIGLAQ6QHK4 219 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 Q6ZRG5 221 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 GPR137CQ8N3F9 429 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 OR13C8Q8NGS7 320 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 OR6N1Q8NGY5 312 aa3.73□□□□□ -1.81
USH2A-201ENST00000307340 MIB2Q96AX9 1013 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms