RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SLC25A19Q9HC21 320 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 PDE7BQ9NP56 450 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 TDRD15B5MCY1 1934 aaKnown RBP12.23□□□□□ -0.45
CASC4-201ENST00000299957 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 A0A0A6YYD5 115 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 CCDC163A0A0D9SF12 145 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 TNFSF12O43508 249 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 SC5DO75845 299 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 NFYAP23511 347 aaPredicted RBP12.23□□□□□ -0.45
CASC4-201ENST00000299957 CD34P28906 385 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 CLDN20P56880 219 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 AIMP2Q13155 320 aaKnown RBP12.23□□□□□ -0.45
CASC4-201ENST00000299957 FAM109BQ6ICB4 259 aaPredicted RBP12.23□□□□□ -0.45
CASC4-201ENST00000299957 LILRA6Q6PI73 481 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 CREB3L2Q70SY1 520 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 ADAMTS14Q8WXS8 1223 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 EMC6Q9BV81 110 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 POLMQ9NP87 494 aaPredicted RBP12.23□□□□□ -0.45
CASC4-201ENST00000299957 CMC2Q9NRP2 79 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 PPIL1Q9Y3C6 166 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 ZNF593O00488 134 aaPredicted RBP12.23□□□□□ -0.45
CASC4-201ENST00000299957 SEMA7AO75326 666 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 MYF5P13349 255 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 KIR2DS3Q14952 304 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 IDO2Q6ZQW0 420 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 TOE1Q96GM8 510 aaKnown RBP12.23□□□□□ -0.45
CASC4-201ENST00000299957 FAM83CQ9BQN1 747 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 TIMM29Q9BSF4 260 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 ST6GALNAC5Q9BVH7 336 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 PARP12Q9H0J9 701 aaKnown RBP12.23□□□□□ -0.45
CASC4-201ENST00000299957 KCNN3Q9UGI6 736 aa12.23□□□□□ -0.45
CASC4-201ENST00000299957 MKI67P46013 3256 aaKnown RBP12.23□□□□□ -0.45
CASC4-201ENST00000299957 ZNF831Q5JPB2 1677 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 M0R036 132 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 UBL4AP11441 157 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 POU3F3P20264 500 aaPredicted RBP12.22□□□□□ -0.45
CASC4-201ENST00000299957 PSMA3P25788 255 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 SMCO1Q147U7 214 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 SLC22A6Q4U2R8 563 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 TMEM205Q6UW68 189 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 KIAA0907Q7Z7F0 614 aaPredicted RBP12.22□□□□□ -0.45
CASC4-201ENST00000299957 CCDC36Q8IYA8 594 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 METTL7AQ9H8H3 244 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.22□□□□□ -0.45
CASC4-201ENST00000299957 TP53BP1Q12888 1972 aaPredicted RBP12.22□□□□□ -0.45
CASC4-201ENST00000299957 ZNF726A6NNF4 738 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 ZNF736B4DX44 427 aaPredicted RBP12.22□□□□□ -0.45
CASC4-201ENST00000299957 H7C2Y5 167 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 SIGLEC5O15389 551 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 HLA-AP01891 365 aaKnown RBP12.22□□□□□ -0.45
CASC4-201ENST00000299957 POU3F4P49335 361 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 TFF2Q03403 129 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 SIGLEC14Q08ET2 396 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 OR7A5Q15622 319 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 GLYATL3Q5SZD4 288 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 FAM69BQ5VUD6 431 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 RPL22L1Q6P5R6 122 aaKnown RBP12.22□□□□□ -0.45
CASC4-201ENST00000299957 FAM219AQ8IW50 185 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 BATF2Q8N1L9 274 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 RCBTB1Q8NDN9 531 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 KLHL15Q96M94 604 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 RBP7Q96R05 134 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 SDHCQ99643 169 aaPredicted RBP12.22□□□□□ -0.45
CASC4-201ENST00000299957 ZNF436Q9C0F3 470 aaPredicted RBP12.22□□□□□ -0.45
CASC4-201ENST00000299957 OR11A1Q9GZK7 315 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 IL20Q9NYY1 176 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 THAP10Q9P2Z0 257 aaPredicted RBP12.22□□□□□ -0.45
CASC4-201ENST00000299957 MBD2Q9UBB5 411 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 GMDSO60547 372 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 PRAMEF2O60811 474 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 OR2T7P0C7T2 308 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 PI3P19957 117 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 ZNF454Q8N9F8 522 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 OR13C9Q8NGT0 318 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 OR2T27Q8NH04 317 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 HSD17B8Q92506 261 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 FKRPQ9H9S5 495 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 ABRACLQ9P1F3 81 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 PRODH2Q9UF12 536 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 RLFQ13129 1914 aa12.22□□□□□ -0.45
CASC4-201ENST00000299957 PRKACAP17612 351 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 DLX5P56178 289 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 SLC9A3R2Q15599 337 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 ST3GAL2Q16842 350 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 SLC6A19Q695T7 634 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 ARSKQ6UWY0 536 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 SSX6Q7RTT6 188 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 TPRA1Q86W33 373 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 BPIFB2Q8N4F0 458 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 RFLNBQ8N5W9 214 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 MORN4Q8NDC4 146 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 PAQR8Q8TEZ7 354 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 ST8SIA2Q92186 375 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 FGF14Q92915 247 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 TOX2Q96NM4 488 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 NKX2-4Q9H2Z4 354 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 NARFLQ9H6Q4 476 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 BCL2L10Q9HD36 194 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 FGF20Q9NP95 211 aaPredicted RBP12.21□□□□□ -0.45
CASC4-201ENST00000299957 WASH6PQ9NQA3 447 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms