RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 OR4C11Q6IEV9 310 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 MBOAT2Q6ZWT7 520 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 RTL10Q7L3V2 364 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 ZNF561Q8N587 486 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 IRF7Q92985 503 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 C14orf79Q96F83 325 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 MRGPRX3Q96LB0 322 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 UCK1Q9HA47 277 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 LHX9Q9NQ69 397 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 C5AR2Q9P296 337 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 TRANK1O15050 2925 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 SLC22A31A6NKX4 558 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 ZNF705EA8MWA4 302 aaPredicted RBP12.03□□□□□ -0.48
NUP54-201ENST00000264883 NUDT19A8MXV4 375 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 F5H0A9 414 aaPredicted RBP12.03□□□□□ -0.48
NUP54-201ENST00000264883 PAPLNO95428 1278 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 LY86O95711 162 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 CTSLP07711 333 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 MYOGP15173 224 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 DLSTP36957 453 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 GPR1P46091 355 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 STARD6P59095 220 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 TAS2R20P59543 309 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 FUT5Q11128 374 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 RBM39Q14498 530 aaKnown RBP12.03□□□□□ -0.48
NUP54-201ENST00000264883 TEX30Q5JUR7 227 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 LIN54Q6MZP7 749 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 BEND4Q6ZU67 534 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 ZNF433Q8N7K0 673 aaPredicted RBP12.03□□□□□ -0.48
NUP54-201ENST00000264883 OR6N1Q8NGY5 312 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 MRPL38Q96DV4 380 aaKnown RBP12.03□□□□□ -0.48
NUP54-201ENST00000264883 NUS1Q96E22 293 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 TEAD3Q99594 435 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 EDEM2Q9BV94 578 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 OR51V1Q9H2C8 321 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 IL21RQ9HBE5 538 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 APMAPQ9HDC9 416 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 ANKRD10Q9NXR5 420 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 TAC3Q9UHF0 121 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 ZNF337Q9Y3M9 751 aa12.03□□□□□ -0.48
NUP54-201ENST00000264883 A0A1B0GTQ1 180 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 OR2AT4A6NND4 320 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 RDH16O75452 317 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 RBBP9O75884 186 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 CD8AP01732 235 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 ANXA2P07355 339 aaKnown RBP12.02□□□□□ -0.49
NUP54-201ENST00000264883 RAB40ALP0C0E4 278 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 SBK2P0C263 348 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 PAX6P26367 422 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 SDHAP31040 664 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 RPS15P62841 145 aaKnown RBP12.02□□□□□ -0.49
NUP54-201ENST00000264883 C9orf50Q5SZB4 431 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 C11orf87Q6NUJ2 197 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 ACOT7LQ6ZUV0 252 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 TMEM200AQ86VY9 491 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 GLB1L2Q8IW92 636 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 RAB42Q8N4Z0 105 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 ZNF565Q8N9K5 539 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 VN1R2Q8NFZ6 395 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 C15orf40Q8WUR7 153 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 RAB40AQ8WXH6 277 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 GFI1Q99684 422 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 MAP3K3Q99759 626 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 SLC46A2Q9BY10 475 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 TTTY10Q9BZA0 68 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 CHST6Q9GZX3 395 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 KLHL31Q9H511 634 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 EXO5Q9H790 373 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 SPHK2Q9NRA0 654 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 DZANK1Q9NVP4 752 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 TREM2Q9NZC2 230 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 COMMD9Q9P000 198 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 CEP290O15078 2479 aa12.02□□□□□ -0.49
NUP54-201ENST00000264883 RNF222A6NCQ9 220 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 RHPN2P1A8MT19 583 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 ZNF879B4DU55 563 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 MAN2B1O00754 1011 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 CDC42EP2O14613 210 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 APEHP13798 732 aaKnown RBP12.01□□□□□ -0.49
NUP54-201ENST00000264883 ZNF14P17017 642 aaPredicted RBP12.01□□□□□ -0.49
NUP54-201ENST00000264883 SRMP19623 302 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 AGAP20933 346 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 PTNP21246 168 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 TRHRP34981 398 aaPredicted RBP12.01□□□□□ -0.49
NUP54-201ENST00000264883 SSR2P43308 183 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 ST8SIA6P61647 398 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 TAF13Q15543 124 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 TP53I3Q53FA7 332 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 PWWP2BQ6NUJ5 590 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 RPL13AP3Q6NVV1 102 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 PARS2Q7L3T8 475 aaKnown RBP12.01□□□□□ -0.49
NUP54-201ENST00000264883 STEAP2Q8NFT2 490 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 OR4A4PQ8NGN8 299 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 STOML3Q8TAV4 291 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 HIST1H2BAQ96A08 127 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 SMIM19Q96E16 107 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 CPNE2Q96FN4 548 aaPredicted RBP12.01□□□□□ -0.49
NUP54-201ENST00000264883 IL17FQ96PD4 163 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 SLC25A18Q9H1K4 315 aa12.01□□□□□ -0.49
NUP54-201ENST00000264883 TMPRSS5Q9H3S3 457 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms