RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ISL1P61371 349 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 H3F3AP84243 136 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 FOXK2Q01167 660 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 PUDPQ08623 228 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 CD47Q08722 323 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 MED21Q13503 144 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 MELKQ14680 651 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 PDK3Q15120 406 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 SNAPC1Q16533 368 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 SMN1Q16637 294 aaKnown RBP8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 ZNF362Q5T0B9 420 aaPredicted RBP8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 LAIR2Q6ISS4 152 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 FAM180AQ6UWF9 173 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 FGD2Q7Z6J4 655 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 GPAT4Q86UL3 456 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 C8orf59Q8N0T1 100 aaPredicted RBP8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 TCEANCQ8N8B7 351 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 OR2T33Q8NG76 320 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 TXNDC15Q96J42 360 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 TSPAN32Q96QS1 320 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 SLC25A18Q9H1K4 315 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 MED20Q9H944 212 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 NRIP3Q9NQ35 241 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 INIPQ9NRY2 104 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 B3GAT1Q9P2W7 334 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 ZNF346Q9UL40 294 aaKnown RBP8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 CORINQ9Y5Q5 1042 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 TEX13CA0A0J9YWL9 993 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 A0A1B0GVC2 190 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 FAM183AA6NL82 134 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 AQP7P3A6NL99 342 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 EIF4E1BA6NMX2 242 aaKnown RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 H7C1C5 153 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 SURF4O15260 269 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 TLX2O43763 284 aaPredicted RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 FZD7O75084 574 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 SMNDC1O75940 238 aaKnown RBP eCLIP8.69□□□□□ -1.027e-8■□□□□ 8.7
SNRNP40-201ENST00000263694 CD14P08571 375 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 HIST1H1CP16403 213 aaKnown RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 NOS3P29474 1203 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 FMO3P31513 532 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 RAC3P60763 192 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 CDC42P60953 191 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 LCN6P62502 163 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 CSNK2A1P68400 391 aaPredicted RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 POU3F1Q03052 451 aaPredicted RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 MFSD13AQ14CX5 517 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 ACKR1Q16570 336 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 ST3GAL2Q16842 350 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 TMEM225Q6GV28 225 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 RPL13AP3Q6NVV1 102 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 PAQR6Q6TCH4 344 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 CASP12Q6UXS9 341 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 NHLRC1Q6VVB1 395 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 DPY19L2P2Q6ZN68 376 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 PTCHD4Q6ZW05 846 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 THAP5Q7Z6K1 395 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 LNX2Q8N448 690 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 MEIOBQ8N635 442 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 SCAIQ8N9R8 606 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 CYB561A3Q8NBI2 242 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 OR4K13Q8NH42 304 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 ZPLD1Q8TCW7 415 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 APH1BQ8WW43 257 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 SNRNP40Q96DI7 357 aaKnown RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 TUBA1CQ9BQE3 449 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 EMC6Q9BV81 110 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 HCAR1Q9BXC0 346 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 POLDIP3Q9BY77 421 aaKnown RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 FN3KQ9H479 309 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 Q9H521 79 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 ASF1BQ9NVP2 202 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 IMPAD1Q9NX62 359 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 MED29Q9NX70 200 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 B3GALT5Q9Y2C3 310 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 RP1L1Q8IWN7 2480 aaPredicted RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 MED12LQ86YW9 2145 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 AQP7O14520 342 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 WBP4O75554 376 aaKnown RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 CRYABP02511 175 aaKnown RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 IFNGR1P15260 489 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 GABRB1P18505 474 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 GRK5P34947 590 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 ACVR1BP36896 505 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 CDKN2AP42771 156 aaKnown RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 PCYT1AP49585 367 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 AGFG1P52594 562 aaKnown RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 EFNB1P98172 346 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 RUNX1T1Q06455 604 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 ZP4Q12836 540 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 CDK5R2Q13319 367 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 MAD2L1BPQ15013 274 aaPredicted RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 INAQ16352 499 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 BCL2A1Q16548 175 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 ANKDD1AQ495B1 522 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 PDSS1Q5T2R2 415 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 ZNF324BQ6AW86 544 aaPredicted RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 KRT80Q6KB66 452 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 FAM122BQ7Z309 247 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 CPOQ8IVL8 374 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms