RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 FN3KRPQ9HA64 309 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 PUS1Q9Y606 427 aaKnown RBP eCLIP4.47□□□□□ -1.69
RC3H1-201ENST00000258349 FAM171A2A8MVW0 826 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 FZD9O00144 591 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 CPEP16870 476 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 TAGLN2P37802 199 aaKnown RBP4.47□□□□□ -1.69
RC3H1-201ENST00000258349 GRB2P62993 217 aaKnown RBP4.47□□□□□ -1.69
RC3H1-201ENST00000258349 SORDQ00796 357 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 TNFRSF17Q02223 184 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 TIGD3Q6B0B8 471 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 HEPHL1Q6MZM0 1159 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 FBXW12Q6X9E4 464 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 FAM57BQ71RH2 274 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 OR5AR1Q8NGP9 310 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 OR2A12Q8NGT7 310 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 SLC38A5Q8WUX1 472 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 ZNF566Q969W8 418 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 TIMM29Q9BSF4 260 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 SGPP1Q9BX95 441 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 SCPEP1Q9HB40 452 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 LHX6Q9UPM6 363 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 PPP1R2P9O14990 202 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 TNFSF12O43508 249 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 GASTP01350 101 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 ADRB1P08588 477 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 SLC35A1P78382 337 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 SQSTM1Q13501 440 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 SLC9A3R2Q15599 337 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 SLC35D3Q5M8T2 416 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 FCRLAQ7L513 359 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 TMEM151BQ8IW70 566 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 SLC22A24Q8N4F4 322 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 SCARB1Q8WTV0 552 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 BRI3BPQ8WY22 251 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 HRASLS5Q96KN8 279 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 ARHGAP9Q9BRR9 750 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 ALG12Q9BV10 488 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 KATNB1Q9BVA0 655 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 METTL9Q9H1A3 318 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 FBXO8Q9NRD0 319 aa4.47□□□□□ -1.69
RC3H1-201ENST00000258349 BOKQ9UMX3 212 aaPredicted RBP4.47□□□□□ -1.69
RC3H1-201ENST00000258349 SHANK1Q9Y566 2161 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 PRAMEF26H0Y7S4 382 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 AP1G1O43747 822 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 EDN1P05305 212 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 IQCF3P0C7M6 154 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 ARAFP10398 606 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 POU3F3P20264 500 aaPredicted RBP4.46□□□□□ -1.69
RC3H1-201ENST00000258349 PTGER4P35408 488 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 IDUAP35475 653 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 GJA5P36382 358 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 RFX2P48378 723 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 EMP2P54851 167 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 SIRPAP78324 504 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 NR0B2Q15466 257 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 TMUB2Q71RG4 321 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 SIAH1Q8IUQ4 282 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 LINC01599Q8WXQ3 324 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 CMSS1Q9BQ75 279 aaKnown RBP4.46□□□□□ -1.69
RC3H1-201ENST00000258349 SPATA6Q9NWH7 488 aaPredicted RBP4.46□□□□□ -1.69
RC3H1-201ENST00000258349 TMEM269A0A1B0GVZ9 245 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 HEPACAM2A8MVW5 462 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 LALBAP00709 142 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 DRD1P21728 446 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 SLC5A2P31639 672 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 GDNFP39905 211 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 OPCMLQ14982 345 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 PAN3Q58A45 887 aaKnown RBP4.46□□□□□ -1.69
RC3H1-201ENST00000258349 MAMDC4Q6UXC1 1216 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 MDGA2Q7Z553 956 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 IL1F10Q8WWZ1 152 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 CPPED1Q9BRF8 314 aaPredicted RBP4.46□□□□□ -1.69
RC3H1-201ENST00000258349 NKX6-2Q9C056 277 aaPredicted RBP4.46□□□□□ -1.69
RC3H1-201ENST00000258349 NDUFB11Q9NX14 153 aa4.46□□□□□ -1.69
RC3H1-201ENST00000258349 DIMT1Q9UNQ2 313 aaKnown RBP4.46□□□□□ -1.69
RC3H1-201ENST00000258349 A6NCN8 305 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 GIPP09681 153 aaPredicted RBP4.46□□□□□ -1.7
RC3H1-201ENST00000258349 DTYMKP23919 212 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 DAPP51397 102 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 SNTB1Q13884 538 aaKnown RBP4.46□□□□□ -1.7
RC3H1-201ENST00000258349 FAM180BQ6P0A1 224 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 UTP4Q969X6 686 aaKnown RBP4.46□□□□□ -1.7
RC3H1-201ENST00000258349 GABARAPL1Q9H0R8 117 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 HRASLSQ9HDD0 168 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 SDK2Q58EX2 2172 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 CCDC85CA6NKD9 419 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 K7EQM0 130 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 RGS11O94810 467 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 ITGB2P05107 769 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 HOXB5P09067 269 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 GCAP28676 217 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 TACR3P29371 465 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 ADRA1AP35348 466 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 MTCP1P56278 107 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 HTR4Q13639 388 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 RAB35Q15286 201 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 SYT6Q5T7P8 510 aaPredicted RBP4.46□□□□□ -1.7
RC3H1-201ENST00000258349 ZNF425Q6IV72 752 aa4.46□□□□□ -1.7
RC3H1-201ENST00000258349 SEMA6DQ8NFY4 1073 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms