RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 MYL12AP19105 171 aa17.06■□□□□ 0.32
TRIM47-201ENST00000254816 SLC2A5P22732 501 aa17.06■□□□□ 0.32
TRIM47-201ENST00000254816 APOBEC1P41238 236 aaKnown RBP17.06■□□□□ 0.32
TRIM47-201ENST00000254816 C1DQ13901 141 aaKnown RBP17.06■□□□□ 0.32
TRIM47-201ENST00000254816 ZNF181Q2M3W8 571 aa17.06■□□□□ 0.32
TRIM47-201ENST00000254816 SLC22A10Q63ZE4 541 aa17.06■□□□□ 0.32
TRIM47-201ENST00000254816 SLC6A19Q695T7 634 aa17.06■□□□□ 0.32
TRIM47-201ENST00000254816 PHC2Q8IXK0 858 aa17.06■□□□□ 0.32
TRIM47-201ENST00000254816 POC5Q8NA72 575 aa17.06■□□□□ 0.32
TRIM47-201ENST00000254816 PAQR8Q8TEZ7 354 aa17.06■□□□□ 0.32
TRIM47-201ENST00000254816 SMAP2Q8WU79 429 aaPredicted RBP17.06■□□□□ 0.32
TRIM47-201ENST00000254816 TMEM203Q969S6 136 aa17.06■□□□□ 0.32
TRIM47-201ENST00000254816 TNFRSF10DQ9UBN6 386 aa17.06■□□□□ 0.32
TRIM47-201ENST00000254816 NCKAP5O14513 1909 aa17.06■□□□□ 0.32
TRIM47-201ENST00000254816 IRGMA1A4Y4 181 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 ARPC3O15145 178 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 CD14P08571 375 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 LIMS3P0CW19 117 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 LIMS4P0CW20 117 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 PAICSP22234 425 aaKnown RBP17.05■□□□□ 0.32
TRIM47-201ENST00000254816 PSMA1P25786 263 aaKnown RBP17.05■□□□□ 0.32
TRIM47-201ENST00000254816 GRPRP30550 384 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 ZNF45Q02386 682 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 RNLSQ5VYX0 342 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 H3F3CQ6NXT2 135 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 MAMDC2Q7Z304 686 aaPredicted RBP17.05■□□□□ 0.32
TRIM47-201ENST00000254816 FAM122BQ7Z309 247 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 TMPRSS12Q86WS5 348 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 FADS6Q8N9I5 356 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 LSM14AQ8ND56 463 aaKnown RBP17.05■□□□□ 0.32
TRIM47-201ENST00000254816 STK35Q8TDR2 534 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 ADAMTS17Q8TE56 1095 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 ZNRF4Q8WWF5 429 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 PSMF1Q92530 271 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 JSRP1Q96MG2 331 aaPredicted RBP17.05■□□□□ 0.32
TRIM47-201ENST00000254816 SECISBP2Q96T21 854 aaKnown RBP17.05■□□□□ 0.32
TRIM47-201ENST00000254816 TBX5Q99593 518 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 SH2D2AQ9NP31 389 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 SNTG1Q9NSN8 517 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 MED13Q9UHV7 2174 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 KLHL21Q9UJP4 597 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 STUB1Q9UNE7 303 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 CNOT1A5YKK6 2376 aaKnown RBP17.05■□□□□ 0.32
TRIM47-201ENST00000254816 OR6C68A6NDL8 312 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 AHSA1O95433 338 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 PLGP00747 810 aaPredicted RBP17.05■□□□□ 0.32
TRIM47-201ENST00000254816 TSPAN19P0C672 248 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 MLLT11Q13015 90 aaPredicted RBP17.05■□□□□ 0.32
TRIM47-201ENST00000254816 SNTA1Q13424 505 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 ACER2Q5QJU3 275 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 RAB43Q86YS6 212 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 NPEPL1Q8NDH3 523 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 GATAD2BQ8WXI9 593 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 C1GALT1C1Q96EU7 318 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 FRMD6Q96NE9 622 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 TSPAN32Q96QS1 320 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 ANGPTL4Q9BY76 406 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 TMEM185BQ9H7F4 350 aa17.05■□□□□ 0.32
TRIM47-201ENST00000254816 CHCHD3Q9NX63 227 aaKnown RBP17.05■□□□□ 0.32
TRIM47-201ENST00000254816 RIF1Q5UIP0 2472 aaKnown RBP17.05■□□□□ 0.32
TRIM47-201ENST00000254816 SPNP16150 400 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 AHCYP23526 432 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 CDKN2AP42771 156 aaKnown RBP17.04■□□□□ 0.32
TRIM47-201ENST00000254816 MXD1Q05195 221 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 AGAP7PQ5VUJ5 663 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 LEG1Q6P5S2 330 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 PLCZ1Q86YW0 608 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 BEST3Q8N1M1 668 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 TMEM99Q8N816 258 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 OR5J2Q8NH18 312 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 GNRHR2Q96P88 292 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 TPK1Q9H3S4 243 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 SMURF1Q9HCE7 757 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 ASB6Q9NWX5 421 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 PCDHGB6Q9Y5F9 930 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 SPIN1Q9Y657 262 aaPredicted RBP17.04■□□□□ 0.32
TRIM47-201ENST00000254816 ALPK2Q86TB3 2170 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 SLC22A31A6NKX4 558 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 MT-ATP6P00846 226 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 TFPIP10646 304 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 DLX5P56178 289 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 SPANXN2Q5MJ10 180 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 ZNF417Q8TAU3 575 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 MRGPRX4Q96LA9 322 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 ZNF587Q96SQ5 575 aaPredicted RBP17.04■□□□□ 0.32
TRIM47-201ENST00000254816 DDOQ99489 341 aa17.04■□□□□ 0.32
TRIM47-201ENST00000254816 RPH3AQ9Y2J0 694 aaPredicted RBP17.04■□□□□ 0.32
TRIM47-201ENST00000254816 EXOSC1Q9Y3B2 195 aaKnown RBP17.04■□□□□ 0.32
TRIM47-201ENST00000254816 H7C1C5 153 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 J3QRE1 110 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 ETV2O00321 342 aaPredicted RBP17.03■□□□□ 0.32
TRIM47-201ENST00000254816 RGS5O15539 181 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 RBMS1P29558 406 aaKnown RBP17.03■□□□□ 0.32
TRIM47-201ENST00000254816 LCN6P62502 163 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 C19orf57Q0VDD7 668 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 OR7A5Q15622 319 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 SLC25A53Q5H9E4 307 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 ATP1A1-AS1Q5TC04 95 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 TMEM81Q6P7N7 255 aa17.03■□□□□ 0.32
TRIM47-201ENST00000254816 ASCL5Q7RTU5 278 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms