RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 C17orf105B2RV13 164 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 TGM5O43548 720 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 PMP2P02689 132 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 ZNF888P0CJ79 500 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 EPHA4P54764 986 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 UBE2IP63279 158 aaKnown RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 LTC4SQ16873 150 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 BTNL8Q6UX41 500 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 SLC35D2Q76EJ3 337 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 IL22RA1Q8N6P7 574 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 ACOT4Q8N9L9 421 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 NECAP1Q8NC96 275 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 OR51A4Q8NGJ6 313 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 CMTM2Q8TAZ6 248 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 APH1BQ8WW43 257 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 TMED6Q8WW62 240 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 TSACCQ96A04 125 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 ZCCHC4Q9H5U6 513 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 GAR1Q9NY12 217 aaKnown RBP12.89□□□□□ -0.35
TARDBP-201ENST00000240185 CHRNA9Q9UGM1 479 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 USP22Q9UPT9 525 aa12.89□□□□□ -0.35
TARDBP-201ENST00000240185 C3P01024 1663 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 COL5A2P05997 1499 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-201ENST00000240185 DDAH2O95865 285 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 ZNF542PQ5EBM4 170 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 SYT9Q86SS6 491 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 AMIGO3Q86WK7 504 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 CLEC1AQ8NC01 280 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 OR4A16Q8NH70 328 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 DHRS4Q9BTZ2 278 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 SEMA4CQ9C0C4 833 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 SLC35D1Q9NTN3 355 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 ETV7Q9Y603 341 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 PAPLNO95428 1278 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 CTRB1P17538 263 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 MAOBP27338 520 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 GATMP50440 423 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 ZNF90Q03938 601 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 CTRB2Q6GPI1 263 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 CD300LGQ6UXG3 332 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 TMEM182Q6ZP80 229 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-201ENST00000240185 MRPL10Q7Z7H8 261 aaKnown RBP12.88□□□□□ -0.35
TARDBP-201ENST00000240185 OR5D18Q8NGL1 313 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 GPR150Q8NGU9 434 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 STRADBQ9C0K7 418 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 POFUT1Q9H488 388 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 CLDND1Q9NY35 253 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 FAM96BQ9Y3D0 163 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 NXPH3O95157 252 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 CHRNB4P30926 498 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 GABRA4P48169 554 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 NPY4RP50391 375 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 ELLP55199 621 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-201ENST00000240185 POU3F1Q03052 451 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-201ENST00000240185 SLC36A2Q495M3 483 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 CCDC74AQ96AQ1 378 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 FAM234AQ9H0X4 552 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 SLC25A32Q9H2D1 315 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 CRLF2Q9HC73 371 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 APOBEC3BQ9UH17 382 aaKnown RBP12.88□□□□□ -0.35
TARDBP-201ENST00000240185 ACAD8Q9UKU7 415 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 ADAM23O75077 832 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 ZNF252P-AS1Q0IIN9 211 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 ESPNLQ6ZVH7 1005 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 ISYNA1Q9NPH2 558 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 SNX11Q9Y5W9 270 aa12.88□□□□□ -0.35
TARDBP-201ENST00000240185 TRDV1A0A1B0GX56 115 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 TUSC2O75896 110 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 OR2F2O95006 317 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 BMP1P13497 986 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 LCN6P62502 163 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 HBA1P69905 142 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 OR2F1Q13607 317 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 TMEM71Q6P5X7 295 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 LINC00299Q6ZSB3 139 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 LGI3Q8N145 548 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 KLHDC1Q8N7A1 406 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 OR51S1Q8NGJ8 323 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 RBPJLQ9UBG7 517 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 RARRES3Q9UL19 164 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 INSL6Q9Y581 213 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 ZNF593O00488 134 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-201ENST00000240185 STC2O76061 302 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 IGHG1P01857 330 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 RPS19P39019 145 aaKnown RBP12.87□□□□□ -0.35
TARDBP-201ENST00000240185 IKZF1Q13422 519 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 HAGHQ16775 308 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 OPN5Q6U736 354 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 TMEM184AQ6ZMB5 413 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 LRRTM1Q86UE6 522 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 USB1Q9BQ65 265 aaKnown RBP12.87□□□□□ -0.35
TARDBP-201ENST00000240185 VN1R3Q9BXE9 311 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 MYOTQ9UBF9 498 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 JUNBP17275 347 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-201ENST00000240185 MRPL19P49406 292 aaKnown RBP12.87□□□□□ -0.35
TARDBP-201ENST00000240185 MLF1P58340 268 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 ENDOGQ14249 297 aaKnown RBP12.87□□□□□ -0.35
TARDBP-201ENST00000240185 LTB4RQ15722 352 aa12.87□□□□□ -0.35
TARDBP-201ENST00000240185 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.87□□□□□ -0.357e-8■□□□□ 8.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms