RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Tmem125Q8CHQ6 216 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 BanpQ8VBU8 548 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Tmem63aQ91YT8 804 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Zfp773Q9CZ29 471 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 RfxankQ9Z205 269 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr1493-ps1A0A140LHU2 316 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Rabl2E9Q9D5 223 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Dmp1O55188 503 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Tk1P04184 233 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Itgb2P11835 771 aaKnown RBP15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 PahP16331 453 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Eif4eP63073 217 aaKnown RBP15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Plcxd3Q8BLJ3 321 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Mtnr1bQ8CIQ6 364 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 NagsQ8R4H7 527 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr820Q8VFU5 312 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Raet1eQ9CZQ6 251 aa15.55■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Zfp141G3UY09 685 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Emx1Q04742 257 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Rhox2aQ9D4Y3 191 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr566A0A1B0GST0 319 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Gm20671F6TVX7 576 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 CfbP04186 761 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Il13P20109 131 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Etv4P28322 485 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Tmem248Q3TBN1 314 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 DtlQ3TLR7 729 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Prss54Q7M756 383 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Cd300ld4A2A7W1 245 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Hbq1bQ3U0A6 142 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Cd300ld3Q6SJQ5 245 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Mfsd9Q8C0T7 466 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 NraddQ8CJ26 228 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Lyrm2Q8R033 88 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Pdzk1ip1Q9CQH0 114 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Pebp4Q9D9G2 242 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Gm20547B8JJN0 1276 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Slc6a13P31649 602 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Surf4Q64310 269 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Adamtsl2Q7TSK7 957 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Slc35f4Q8BZK4 485 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Gtf2h5Q8K2X8 71 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 HaghQ99KB8 309 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Gpld1O70362 837 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 PlatP11214 559 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Mmp25Q3U435 615 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Rab35Q6PHN9 201 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Bcl2l14Q9CPT0 328 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Cacng3Q9JJV5 315 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Sox9Q04887 507 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Ccdc117Q6PB51 277 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Rwdd3Q8VIL2 267 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 D10Jhu81eQ9D172 266 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Ndrg2Q9QYG0 371 aaKnown RBP15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 MokQ9WVS4 420 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Dock5B2RY04 1868 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Srpx2Q8R054 468 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr361Q8VF16 322 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Zmynd19Q9CQG3 227 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Mrpl41Q9CQN7 135 aaKnown RBP15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Ccnl2Q9JJA7 518 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Cd160O88875 185 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 CfhP06909 1234 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Tyrp1P07147 537 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Csnk1g3Q8C4X2 424 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Oit3Q8R4V5 546 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Il36bQ9D6Z6 183 aa15.54■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr1249L7MU51 318 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Bcat2O35855 393 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Bmi1P25916 324 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Il2rgP34902 369 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 TrmoQ562D6 431 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 NnatQ61979 81 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 CbarpQ66L44 698 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Cpa4Q6P8K8 420 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Synpo2lQ8BWB1 975 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Sco2Q8VCL2 255 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Gm10269G3UWD7 123 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Nfatc1O88942 717 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 LepP41160 167 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 NfybP63139 207 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Rps10P63325 165 aaKnown RBP15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Lrrc30Q3UV48 300 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Osbp2Q5QNQ6 908 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Cdt1Q8R4E9 557 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Msmo1Q9CRA4 293 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr27Q9EQ90 311 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Sgk3Q9ERE3 496 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Lhx6Q9R1R0 363 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Pi4kaE9Q3L2 2105 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Esp8F7AMQ8 149 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Klk1b8P07628 261 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr1307Q7TQX1 312 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr883Q8VF64 309 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Acy1Q99JW2 408 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Il1r2P27931 410 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Slc35f3Q1LZI2 421 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr1347Q8VF33 319 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Cdc42ep1Q91W92 409 aa15.53■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 P01652 108 aa15.53■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms