RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	HS3ST1	O14792	307 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	KRT33A	O76009	404 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	IFNA14	P01570	189 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	BGLAP	P02818	100 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	ZNF43	P17038	809 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	PTN	P21246	168 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	MPG	P29372	298 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	LSP1	P33241	339 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	SELENOP	P49908	381 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	BSPH1	Q075Z2	132 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	GABRA6	Q16445	453 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	C9orf135	Q5VTT2	229 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	NIPAL3	Q6P499	406 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	LINC00114	Q6XXX2	140 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	CARM1	Q86X55	608 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	TREML1	Q86YW5	311 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	ADPRHL1	Q8NDY3	354 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	OR2T12	Q8NG77	320 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	ADAMTS16	Q8TE57	1224 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	PIP5K1A	Q99755	562 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	FAM107B	Q9H098	131 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	EFCAB1	Q9HAE3	211 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	B3GAT1	Q9P2W7	334 aa		13.22	□□□□□ -0.29
PHGDH-231	ENST00000641939	LOC102725191	A0A1B0GVB3	256 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	ELOVL7	A1L3X0	281 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	DPRX	A6NFQ7	191 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	CLOCK	O15516	846 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	THY1	P04216	161 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	NQO1	P15559	274 aa	Known RBP	13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	DRD4	P21917	467 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	CBL	P22681	906 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	CLDN17	P56750	224 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	IL1RL1	Q01638	556 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	LTB	Q06643	244 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	C1D	Q13901	141 aa	Known RBP	13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	ADAM5	Q6NVV9	412 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	CPLX4	Q7Z7G2	160 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	TGIF2LY	Q8IUE0	185 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	MICU2	Q8IYU8	434 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	C10orf53	Q8N6V4	93 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	ZNF611	Q8N823	705 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	SCAI	Q8N9R8	606 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	OR52N5	Q8NH56	324 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	SLC41A3	Q96GZ6	507 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	MPP4	Q96JB8	637 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	MOGAT1	Q96PD6	335 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	HOPX	Q9BPY8	73 aa	Predicted RBP	13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	ASPN	Q9BXN1	380 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	MYLK2	Q9H1R3	596 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	CMTM6	Q9NX76	183 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	NPAP1	Q9NZP6	1156 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	SLC7A7	Q9UM01	511 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	RCE1	Q9Y256	329 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	SH3GLB1	Q9Y371	365 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	SLC25A15	Q9Y619	301 aa		13.21	□□□□□ -0.29
PHGDH-231	ENST00000641939	GMNC	A6NCL1	334 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	ZNF587B	E7ETH6	402 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	MS4A18	H0YCH9	400 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	SNX3	O60493	162 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	SMPD2	O60906	423 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	LYPD3	O95274	346 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	HOXC12	P31275	282 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	KDELR2	P33947	212 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	LGALS3BP	Q08380	585 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	MS4A18	Q3C1V0	323 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	LRRC23	Q53EV4	343 aa	Predicted RBP	13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	TTC33	Q6PID6	262 aa	Predicted RBP	13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	KLHL17	Q6TDP4	642 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	HACD2	Q6Y1H2	254 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	WDR88	Q6ZMY6	472 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	SLC15A3	Q8IY34	581 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	C17orf78	Q8N4C9	275 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	CMTM5	Q96DZ9	223 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	SLC17A5	Q9NRA2	495 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	MRPL39	Q9NYK5	338 aa	Known RBP	13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	AMDHD2	Q9Y303	409 aa		13.2	□□□□□ -0.3
PHGDH-231	ENST00000641939	ZFHX3	Q15911	3703 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939		A0A1W2PR80	420 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	LRRN3	E7EW58	273 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	AKAP8	O43823	692 aa	Known RBP	13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	UPK3A	O75631	287 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	ZNF432	O94892	652 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	MT-ATP6	P00846	226 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	CDH2	P19022	906 aa	Predicted RBP	13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	TNFRSF1B	P20333	461 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	NUDT2	P50583	147 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	ZNF83	P51522	516 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	SLC7A2	P52569	658 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	GYS2	P54840	703 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	ADAM8	P78325	824 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	LIPE	Q05469	1076 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	PUDP	Q08623	228 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	PMS2P3	Q13401	168 aa		13.19	□□□□□ -0.3
PHGDH-231	ENST00000641939	ZNF672	Q499Z4	452 aa	Predicted RBP	13.19	□□□□□ -0.3

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