RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 WDR55Q9H6Y2 383 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 LIN28AQ9H9Z2 209 aaKnown RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 CUEDC1Q9NWM3 386 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 MKS1Q9NXB0 559 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ADAM29Q9UKF5 820 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ZMIZ1Q9ULJ6 1067 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 SLC22A7Q9Y694 548 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 FANCMQ8IYD8 2048 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 TJP1Q07157 1748 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 LIFP15018 202 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 PSMB5P28074 263 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 CLDN10P78369 228 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 COTL1Q14019 142 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 PPP1R3AQ16821 1122 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF658BQ4V348 819 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 DCAF10Q5QP82 559 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 DCST2Q5T1A1 773 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 GPR157Q5UAW9 335 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 CARM1Q86X55 608 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 FITM2Q8N6M3 262 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 PSD4Q8NDX1 1056 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 GATA5Q9BWX5 397 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 CCM2LQ9NUG4 571 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 TAS2R8Q9NYW2 309 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 CRYM-AS1A6NIL9 109 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 AGAP5A6NIR3 686 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 hCG_2039718K7EN88 272 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 M0R233 179 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 SYT7O43581 403 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 APOA2P02652 100 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ELK4P28324 431 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 SOX18P35713 384 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 PDLIM4P50479 330 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ARL16Q0P5N6 197 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ODF4Q2M2E3 257 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 PAN3Q58A45 887 aaKnown RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 C1orf185Q5T7R7 199 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 LRRN1Q6UXK5 716 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 C12orf54Q6X4T0 127 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ABI3BPQ7Z7G0 1075 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 DPPA2Q7Z7J5 298 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 CCDC28AQ8IWP9 274 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 CCDC71LQ8N9Z2 235 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 UFD1Q92890 307 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 NIPAL2Q9H841 368 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 PCOLCE2Q9UKZ9 415 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 FBXO7Q9Y3I1 522 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 YTHDF2Q9Y5A9 579 aaKnown RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 CD8B2A6NJW9 211 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ARL6IP5O75915 188 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 MT-ND2P03891 347 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 CNR1P21554 472 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 TEAD1P28347 426 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 HLCSP50747 726 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 MFAP5Q13361 173 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 CRTC2Q53ET0 693 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 RNASE10Q5GAN6 216 aaKnown RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 EGFL6Q8IUX8 553 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 SVOPLQ8N434 492 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 NHLRC2Q8NBF2 726 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 SLC35B2Q8TB61 432 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ROPN1LQ96C74 230 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ZFP3Q96NJ6 502 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 PEBP4Q96S96 227 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 MACROD1Q9BQ69 325 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF700Q9H0M5 742 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 RGCCQ9H4X1 137 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 MYOZ1Q9NP98 299 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ETAA1Q9NY74 926 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 WNK1Q9H4A3 2382 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 PRAMEF27A3QJZ7 478 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 A8MT66 165 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 J3QLW9 94 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 CXCL13O43927 109 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF19P17023 458 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 IVDP26440 423 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 CCR7P32248 378 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 KLF1Q13351 362 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 NRN1LQ496H8 165 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 C6orf183Q5T699 404 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 FAM131AQ6UXB0 335 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 OR2V1Q8NHB1 315 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ABHD4Q8TB40 342 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 HPSE2Q8WWQ2 592 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 TEX101Q9BY14 249 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ZFYVE26Q68DK2 2539 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 DOPEY1Q5JWR5 2465 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 EPOPA6NHQ4 379 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 TP73O15350 636 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 NDUFB2O95178 105 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ORM1P02763 201 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 APEHP13798 732 aaKnown RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 GM2AP17900 193 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 HTR1EP28566 365 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ACTA2P62736 377 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ACTC1P68032 377 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ACTA1P68133 377 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 TLE4Q04727 773 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 SMAGPQ0VAQ4 97 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 HENMT1Q5T8I9 393 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms