RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 ANKRD2Q9GZV1 360 aa-1.05□□□□□ -2.58
LMBR1-222ENST00000638959 NAT10Q9H0A0 1025 aaKnown RBP-1.05□□□□□ -2.58
LMBR1-222ENST00000638959 POLR3FQ9H1D9 316 aaPredicted RBP-1.05□□□□□ -2.58
LMBR1-222ENST00000638959 UBE2ZQ9H832 354 aaPredicted RBP-1.05□□□□□ -2.58
LMBR1-222ENST00000638959 VPS37BQ9H9H4 285 aa-1.05□□□□□ -2.58
LMBR1-222ENST00000638959 ISYNA1Q9NPH2 558 aa-1.05□□□□□ -2.58
LMBR1-222ENST00000638959 TMEM161AQ9NX61 479 aa-1.05□□□□□ -2.58
LMBR1-222ENST00000638959 CHCHD3Q9NX63 227 aaKnown RBP-1.05□□□□□ -2.58
LMBR1-222ENST00000638959 IKBKGQ9Y6K9 419 aa-1.05□□□□□ -2.58
LMBR1-222ENST00000638959 CACNA1EQ15878 2313 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 IGKV1-6A0A0C4DH72 117 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 TTC26A0AVF1 554 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 C5orf51A6NDU8 294 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 CCER2I3L3R5 266 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 LHBP01229 141 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 GKN3PP0CG01 181 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 UROSP10746 265 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 H2AFXP16104 143 aaPredicted RBP-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 MSR1P21757 451 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 PSMB5P28074 263 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 CASP14P31944 242 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 SOX6P35712 828 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 CAPZA1P52907 286 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 MRPS6P82932 125 aaKnown RBP-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 ACSF3Q4G176 576 aaPredicted RBP-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 TMEM69Q5SWH9 247 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 KCTD16Q68DU8 428 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 APOBEC3HQ6NTF7 200 aaKnown RBP-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 CCDC137Q6PK04 289 aaKnown RBP-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 CEMP1Q6PRD7 247 aaPredicted RBP-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 TBPL2Q6SJ96 375 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 Q6ZN92 141 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 CYS1Q717R9 158 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 STPG2Q8N412 459 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 ELMO2Q96JJ3 720 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 CNDP2Q96KP4 475 aaKnown RBP-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 TSSK3Q96PN8 268 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 DSN1Q9H410 356 aa-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 ZSCAN16Q9H4T2 348 aaPredicted RBP-1.06□□□□□ -2.58
LMBR1-222ENST00000638959 BRD4O60885 1362 aaPredicted RBP-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 TRAV6A0A075B6T7 132 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 OR6C65A6NJZ3 312 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 C15orf65H3BRN8 121 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 PSMA7O14818 248 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 HLA-DPB1P04440 258 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 CCDC175P0C221 793 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 MPV17P39210 176 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 AIMP1Q12904 312 aaKnown RBP-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 FZD2Q14332 565 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 DEFB115Q30KQ5 88 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 AMZ2Q86W34 360 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 ZNF101Q8IZC7 436 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 ADIPOR1Q96A54 375 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 ZFP3Q96NJ6 502 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 TBCDQ9BTW9 1192 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 TBC1D10AQ9BXI6 508 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 COMMD4Q9H0A8 199 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 PARP12Q9H0J9 701 aaKnown RBP-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 GLRX2Q9NS18 164 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 TNCP24821 2201 aa-1.07□□□□□ -2.58
LMBR1-222ENST00000638959 IGSF10Q6WRI0 2623 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 A0A1B0GUH1 482 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 A0A1W2PNM2 257 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 LEUTXA8MZ59 168 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 ALOX15BO15296 676 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 SYNGR2O43760 224 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 NME6O75414 186 aaPredicted RBP-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 CYB5R3P00387 301 aaPredicted RBP-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 FABP3P05413 133 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 UBTFL6P0CB48 400 aaPredicted RBP-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 XRCC1P18887 633 aaPredicted RBP-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 ME2P23368 584 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 ANXA13P27216 316 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 KCNJ1P48048 391 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 CLNS1AP54105 237 aaKnown RBP-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 CCL23P55773 120 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 RGS1Q08116 209 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 AP1B1Q10567 949 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 CUL1Q13616 776 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 BTG3Q14201 252 aaPredicted RBP-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 MAPRE1Q15691 268 aaKnown RBP-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 ALFQ53S48 1182 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 ANKRD26P1Q6NSI1 321 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 ZNF322Q6U7Q0 402 aaPredicted RBP-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 C4orf50Q6ZRC1 276 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 ASCL5Q7RTU5 278 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 BNIPLQ7Z465 357 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 SPATA19Q7Z5L4 167 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 SNX20Q7Z614 316 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 IQCA1Q86XH1 822 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 EGFL6Q8IUX8 553 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 KIR3DL3Q8N743 410 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 OR4A16Q8NH70 328 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 KIF18AQ8NI77 898 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 FGF14Q92915 247 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 TMEM45BQ96B21 275 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 CCDC51Q96ER9 411 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 HPDLQ96IR7 371 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 ZNF488Q96MN9 340 aa-1.08□□□□□ -2.58
LMBR1-222ENST00000638959 PANX3Q96QZ0 392 aa-1.08□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms