RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 BTG2P78543 158 aa11.65□□□□□ -0.54
LINC00540-203ENST00000631321 SHHQ15465 462 aa11.65□□□□□ -0.54
LINC00540-203ENST00000631321 ZNF74Q16587 644 aa11.65□□□□□ -0.54
LINC00540-203ENST00000631321 ZNF542PQ5EBM4 170 aa11.65□□□□□ -0.54
LINC00540-203ENST00000631321 ELFN2Q5R3F8 820 aa11.65□□□□□ -0.54
LINC00540-203ENST00000631321 WBP2NLQ6ICG8 309 aa11.65□□□□□ -0.54
LINC00540-203ENST00000631321 SEZ6L2Q6UXD5 910 aa11.65□□□□□ -0.54
LINC00540-203ENST00000631321 SLC16A9Q7RTY1 509 aa11.65□□□□□ -0.54
LINC00540-203ENST00000631321 LUZP2Q86TE4 346 aa11.65□□□□□ -0.54
LINC00540-203ENST00000631321 OR11H4Q8NGC9 324 aa11.65□□□□□ -0.54
LINC00540-203ENST00000631321 ANGPTL6Q8NI99 470 aa11.65□□□□□ -0.54
LINC00540-203ENST00000631321 GIMAP1Q8WWP7 306 aa11.65□□□□□ -0.54
LINC00540-203ENST00000631321 RXFP3Q9NSD7 469 aa11.65□□□□□ -0.54
LINC00540-203ENST00000631321 REV3LO60673 3130 aa11.65□□□□□ -0.54
LINC00540-203ENST00000631321 NAP1L6A6NFF2 107 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 IDSB3KWA1 339 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 GABARAPH6UMI1 98 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 SULT1B1O43704 296 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 CDC123O75794 336 aaPredicted RBP11.65□□□□□ -0.55
LINC00540-203ENST00000631321 ZFPL1O95159 310 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 ECDO95905 644 aaPredicted RBP11.65□□□□□ -0.55
LINC00540-203ENST00000631321 CD14P08571 375 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 MNDAP41218 407 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 OR3A3P47888 321 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 MAT1AQ00266 395 aaKnown RBP11.65□□□□□ -0.55
LINC00540-203ENST00000631321 NNATQ16517 81 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 LEG1Q6P5S2 330 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 IZUMO1Q8IYV9 350 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 ZDHHC1Q8WTX9 485 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 MAP6Q96JE9 813 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 Q96M85 177 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 SMAD5Q99717 465 aaKnown RBP11.65□□□□□ -0.55
LINC00540-203ENST00000631321 C8orf33Q9H7E9 229 aaPredicted RBP11.65□□□□□ -0.55
LINC00540-203ENST00000631321 EXOSC3Q9NQT5 275 aaKnown RBP11.65□□□□□ -0.55
LINC00540-203ENST00000631321 NANSQ9NR45 359 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 PRODH2Q9UF12 536 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 MMP17Q9ULZ9 603 aa11.65□□□□□ -0.55
LINC00540-203ENST00000631321 UNC80Q8N2C7 3258 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 ACOD1A6NK06 481 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 KHNYNO15037 678 aaKnown RBP11.64□□□□□ -0.55
LINC00540-203ENST00000631321 IGLV3-19P01714 112 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 AQP2P41181 271 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 GRK6P43250 576 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 P2RX3P56373 397 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 HSD17B7P56937 341 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 ERV3-1Q14264 604 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 HES5Q5TA89 166 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 KIAA0895LQ68EN5 471 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 FAM109AQ8N4B1 249 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 MS4A3Q96HJ5 214 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 C20orf85Q9H1P6 137 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 HEXA-AS1Q9H8Q6 139 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 HRASLSQ9HDD0 168 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 V9GY05 133 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 ELOA3DA6NLF2 546 aaPredicted RBP11.64□□□□□ -0.55
LINC00540-203ENST00000631321 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.64□□□□□ -0.55
LINC00540-203ENST00000631321 PRAF2O60831 178 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 PEX14O75381 377 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 UPK3AO75631 287 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 TPPPO94811 219 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 ABHD16AO95870 558 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 RAF1P04049 648 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 TACSTD2P09758 323 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 RAB40ALP0C0E4 278 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 CALCBP10092 127 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 POU3F3P20264 500 aaPredicted RBP11.64□□□□□ -0.55
LINC00540-203ENST00000631321 MAOAP21397 527 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 PTH2RP49190 550 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 PGDP52209 483 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 AP3S2P59780 193 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 SKP2Q13309 424 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 CAMK2DQ13557 499 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 ELOA3BQ3SY89 546 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 LINGO2Q7L985 606 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 NUP54Q7Z3B4 507 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 JAZF1Q86VZ6 243 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 PIAS4Q8N2W9 510 aaPredicted RBP11.64□□□□□ -0.55
LINC00540-203ENST00000631321 FRMD1Q8N878 549 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 ELOA3Q8NG57 546 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 RAB40AQ8WXH6 277 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 TCTN2Q96GX1 697 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 PELOQ9BRX2 385 aaKnown RBP11.64□□□□□ -0.55
LINC00540-203ENST00000631321 SLC25A18Q9H1K4 315 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 DLL4Q9NR61 685 aa11.64□□□□□ -0.55
LINC00540-203ENST00000631321 TRBV5-5A0A0J9YX44 114 aa11.63□□□□□ -0.55
LINC00540-203ENST00000631321 NOS1APO75052 506 aaPredicted RBP11.63□□□□□ -0.55
LINC00540-203ENST00000631321 TGM6O95932 706 aa11.63□□□□□ -0.55
LINC00540-203ENST00000631321 ASAH2BP0C7U1 165 aa11.63□□□□□ -0.55
LINC00540-203ENST00000631321 THEGLP0DJG4 465 aa11.63□□□□□ -0.55
LINC00540-203ENST00000631321 CTSEP14091 401 aa11.63□□□□□ -0.55
LINC00540-203ENST00000631321 SDHAP31040 664 aa11.63□□□□□ -0.55
LINC00540-203ENST00000631321 UQCRC1P31930 480 aa11.63□□□□□ -0.55
LINC00540-203ENST00000631321 GABRA4P48169 554 aa11.63□□□□□ -0.55
LINC00540-203ENST00000631321 MRPS10P82664 201 aaKnown RBP11.63□□□□□ -0.55
LINC00540-203ENST00000631321 DLX2Q07687 328 aaPredicted RBP11.63□□□□□ -0.55
LINC00540-203ENST00000631321 C1orf61Q13536 156 aa11.63□□□□□ -0.55
LINC00540-203ENST00000631321 CD226Q15762 336 aa11.63□□□□□ -0.55
LINC00540-203ENST00000631321 COL28A1Q2UY09 1125 aa11.63□□□□□ -0.55
LINC00540-203ENST00000631321 EMC4Q5J8M3 183 aa11.63□□□□□ -0.55
LINC00540-203ENST00000631321 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms