RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 PRPS1P60891 318 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 ZNF91Q05481 1191 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 TMEM44Q2T9K0 475 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 PLEKHN1Q494U1 663 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 ACER2Q5QJU3 275 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 DCAF10Q5QP82 559 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 AADACL4Q5VUY2 407 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 SLC22A10Q63ZE4 541 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 C5orf46Q6UWT4 87 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 STX19Q8N4C7 294 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 LRRC75AQ8NAA5 344 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 CLEC1AQ8NC01 280 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 BBS1Q8NFJ9 593 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 OR2M3Q8NG83 312 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 OR4K17Q8NGC6 315 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 POC1BQ8TC44 478 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 HCAR1Q9BXC0 346 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 LHPPQ9H008 270 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 PTGES2Q9H7Z7 377 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 HINT3Q9NQE9 182 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 TAS2R16Q9NYV7 291 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 TEKT2Q9UIF3 430 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 B3GNT3Q9Y2A9 372 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 ALPK2Q86TB3 2170 aa8.57□□□□□ -1.04
PDLIM5-223ENST00000627587 MYO9AB2RTY4 2548 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 A8MVM7 634 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 SHISA8B8ZZ34 492 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 H3BSA7 217 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 PRODHO43272 600 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 SEC14L2O76054 403 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 INMTO95050 263 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 BGLAPP02818 100 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 DBTP11182 482 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 PIPP12273 146 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 IL11P20809 199 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 NOS3P29474 1203 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 RPL4P36578 427 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 APOBEC1P41238 236 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 RPS5P46782 204 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 ST3GAL4Q11206 333 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 FOXF1Q12946 379 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 AIMP2Q13155 320 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 MRPL49Q13405 166 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 IRF3Q14653 427 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 PLPPR5Q32ZL2 321 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 ANKDD1AQ495B1 522 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 SLC25A53Q5H9E4 307 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 IGFN1Q86VF2 1251 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 GPALPP1Q8IXQ4 340 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 ZADH2Q8N4Q0 377 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 ANKK1Q8NFD2 765 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 OR13F1Q8NGS4 319 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 MOSPD2Q8NHP6 518 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 STK35Q8TDR2 534 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 MUL1Q969V5 352 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 SNRNP40Q96DI7 357 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 DNAJA3Q96EY1 480 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 MRGPRX4Q96LA9 322 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 TUBA1CQ9BQE3 449 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 TAPBPLQ9BX59 468 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 ANGPTL4Q9BY76 406 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 OR11A1Q9GZK7 315 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 FN3KQ9H479 309 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 FKRPQ9H9S5 495 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 ACOT13Q9NPJ3 140 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 CMC2Q9NRP2 79 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 ANKRD10Q9NXR5 420 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 SEC14L4Q9UDX3 406 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 CHRNA9Q9UGM1 479 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 HIF3AQ9Y2N7 669 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 RELNP78509 3460 aa8.56□□□□□ -1.04
PDLIM5-223ENST00000627587 A0A0G2JMM0 328 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 A0A1W2PPB8 328 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 A0A1W2PRS3 328 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 A1L4Q6 167 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 ANKRD33BA6NCL7 494 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 CCDC160A6NGH7 325 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 FAM183AA6NL82 134 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 RIIAD1A6NNX1 92 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 KIR3DP1A8MWS1 328 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 BLOC1S5-TXNDC5H3BN57 136 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 PPP1R3DO95685 299 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 FADS2O95864 444 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 MT-ATP6P00846 226 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 IFNGP01579 166 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 HIST1H2ABP04908 130 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 PEPDP12955 493 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 ITGA3P26006 1051 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 MAP2K6P52564 334 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 PER3P56645 1201 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 SLC35F1Q5T1Q4 408 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 FAM69AQ5T7M9 428 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 NXNL2Q5VZ03 156 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 ARHGAP11AQ6P4F7 1023 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 DPY19L2P2Q6ZN68 376 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 HIST3H2AQ7L7L0 130 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 NANOGNBQ7Z5D8 188 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 PLCZ1Q86YW0 608 aa8.55□□□□□ -1.04
PDLIM5-223ENST00000627587 RORBQ92753 470 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms