RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 CMA1P23946 247 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 GABRR1P24046 479 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 ARRB1P49407 418 aaPredicted RBP3.48□□□□□ -1.85
CPNE3-213ENST00000622183 APOC4P55056 127 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 CCNA1P78396 465 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 TGFBR3Q03167 851 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 ENPEPQ07075 957 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 SRSF5Q13243 272 aaKnown RBP3.48□□□□□ -1.85
CPNE3-213ENST00000622183 ARFRP1Q13795 201 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 RNF212Q495C1 297 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 CASC10Q5T4H9 136 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 FHL5Q5TD97 284 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 TMIGD1Q6UXZ0 262 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 SLC25A48Q6ZT89 311 aaKnown RBP3.48□□□□□ -1.85
CPNE3-213ENST00000622183 PLA2G4DQ86XP0 818 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 TGIF2LYQ8IUE0 185 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 PIANPQ8IYJ0 282 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 BBS5Q8N3I7 341 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 CEP112Q8N8E3 955 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 FNDC5Q8NAU1 212 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 LINC01006Q8NI28 216 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 MBOAT4Q96T53 435 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 NAT9Q9BTE0 207 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 VPS37BQ9H9H4 285 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 B4GALT7Q9UBV7 327 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 CDH10Q9Y6N8 788 aa3.48□□□□□ -1.85
CPNE3-213ENST00000622183 FANCIQ9NVI1 1328 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 HAT1O14929 419 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 AGPAT2O15120 278 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 BBOX1O75936 387 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 FGF1P05230 155 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 TOP1P11387 765 aaKnown RBP3.47□□□□□ -1.85
CPNE3-213ENST00000622183 COX7A1P24310 79 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 HSD17B2P37059 387 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 ERVK-25P63136 954 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 KCNJ2P63252 427 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 PPP1R7Q15435 360 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 HSP90AB3PQ58FF7 597 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 C1orf94Q6P1W5 598 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 ZNF546Q86UE3 836 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 ERI1Q8IV48 349 aaKnown RBP3.47□□□□□ -1.85
CPNE3-213ENST00000622183 ZNF584Q8IVC4 421 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 TTC5Q8N0Z6 440 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 ZNF740Q8NDX6 193 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 TSG101Q99816 390 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 MFFQ9GZY8 342 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 GBA3Q9H227 469 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 RNF167Q9H6Y7 350 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 SLC25A22Q9H936 323 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 LY9Q9HBG7 655 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 PLGRKTQ9HBL7 147 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 IL26Q9NPH9 171 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 KCNIP1Q9NZI2 227 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 PSMC3IPQ9P2W1 217 aaPredicted RBP3.47□□□□□ -1.85
CPNE3-213ENST00000622183 NSD2O96028 1365 aa3.47□□□□□ -1.85
CPNE3-213ENST00000622183 PSMB11A5LHX3 300 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 PSTPIP1O43586 416 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 SERPIND1P05546 499 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 CT62P0C5K7 136 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 UBTFL1P0CB47 393 aaPredicted RBP3.46□□□□□ -1.86
CPNE3-213ENST00000622183 TNNI1P19237 187 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 CHMLP26374 656 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 HNRNPH3P31942 346 aaKnown RBP3.46□□□□□ -1.86
CPNE3-213ENST00000622183 TAS2R19P59542 299 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 KRTAP10-6P60371 365 aaPredicted RBP3.46□□□□□ -1.86
CPNE3-213ENST00000622183 ATP6AP1Q15904 470 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 CCDC14Q49A88 953 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 XKR7Q5GH72 579 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 OR6C4Q8NGE1 309 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 NEIL3Q8TAT5 605 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 ACOT11Q8WXI4 607 aaPredicted RBP3.46□□□□□ -1.86
CPNE3-213ENST00000622183 FGF14Q92915 247 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 UCN3Q969E3 161 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 MS4A4EQ96PG1 132 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 OR8B4Q96RC9 309 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 ILKAPQ9H0C8 392 aaPredicted RBP3.46□□□□□ -1.86
CPNE3-213ENST00000622183 RANBP3Q9H6Z4 567 aaPredicted RBP3.46□□□□□ -1.86
CPNE3-213ENST00000622183 QPCTLQ9NXS2 382 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 MMP17Q9ULZ9 603 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 STARD10Q9Y365 291 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 NEUROG3Q9Y4Z2 214 aa3.46□□□□□ -1.86
CPNE3-213ENST00000622183 IGLV3-22A0A075B6J6 115 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 FAM231BA6NCW3 169 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 RNF13O43567 381 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 AGTP01019 485 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 IFNA8P32881 189 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 VDAC2P45880 294 aaPredicted RBP3.45□□□□□ -1.86
CPNE3-213ENST00000622183 TIMM10P62072 90 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 ORC2Q13416 577 aaPredicted RBP3.45□□□□□ -1.86
CPNE3-213ENST00000622183 NSDHLQ15738 373 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 OTPQ5XKR4 325 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 CARD17Q5XLA6 110 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 IL34Q6ZMJ4 242 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 RFLNAQ6ZTI6 216 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 SPAG16Q8N0X2 631 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 SPATA4Q8NEY3 305 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 OR2L5Q8NG80 312 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 OR9G1Q8NH87 305 aa3.45□□□□□ -1.86
CPNE3-213ENST00000622183 FRAT1Q92837 279 aaPredicted RBP3.45□□□□□ -1.86
CPNE3-213ENST00000622183 SMARCD2Q92925 531 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms