RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ACBD4Q8NC06 268 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 MCFD2Q8NI22 146 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 SLC7A6Q92536 515 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 MUL1Q969V5 352 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 RAB33BQ9H082 229 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 GPN2Q9H9Y4 310 aaPredicted RBP9.53□□□□□ -0.88
VPS11-208ENST00000621676 FAM208BQ5VWN6 2430 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 CASKO14936 926 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 NDUFB2O95178 105 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 AHSA1O95433 338 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 PRKCAP17252 672 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 PGCP20142 388 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 GSTM3P21266 225 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 CASP3P42574 277 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 PRKXP51817 358 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 TUBA4AP68366 448 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 RELAQ04206 551 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 ACKR1Q16570 336 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 CTF1Q16619 201 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 BATF2Q8N1L9 274 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 OR5J2Q8NH18 312 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 PITX2Q99697 317 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 DEFB127Q9H1M4 99 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 OR51B6Q9H340 312 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 RHBDL2Q9NX52 303 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 IGHV3-64DA0A0J9YX35 117 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 ANKRD33BA6NCL7 494 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 ACOD1A6NK06 481 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 NTN3O00634 580 aaPredicted RBP9.53□□□□□ -0.88
VPS11-208ENST00000621676 TBX1O43435 398 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 EFNA2O43921 213 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 PPM1BO75688 479 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 PAHP00439 452 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 DPP4P27487 766 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 CLDN20P56880 219 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 COX10Q12887 443 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 PON3Q15166 354 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 COMMD2Q86X83 199 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 TMCO6Q96DC7 493 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 ADAD1Q96M93 576 aaKnown RBP9.53□□□□□ -0.88
VPS11-208ENST00000621676 TTYH2Q9BSA4 534 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 ALG8Q9BVK2 526 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 KRCC1Q9NPI7 259 aaPredicted RBP9.53□□□□□ -0.88
VPS11-208ENST00000621676 ACOXLQ9NUZ1 547 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 ETAA1Q9NY74 926 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 NTMQ9P121 344 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 COPS3Q9UNS2 423 aa9.53□□□□□ -0.88
VPS11-208ENST00000621676 PRODHO43272 600 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 WDPCPO95876 746 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 SLC2A2P11168 524 aaPredicted RBP9.52□□□□□ -0.89
VPS11-208ENST00000621676 CDK4P11802 303 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 TCF15Q12870 199 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 MFAP5Q13361 173 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 PCOLCEQ15113 449 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 ZNF362Q5T0B9 420 aaPredicted RBP9.52□□□□□ -0.89
VPS11-208ENST00000621676 OR7E24Q6IFN5 339 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 ZCCHC12Q6PEW1 402 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 ESPNLQ6ZVH7 1005 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 GALNTL5Q7Z4T8 443 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 TOR1AIP2Q8NFQ8 470 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 OR2Y1Q8NGV0 311 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 NXPE2Q96DL1 559 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 ASPNQ9BXN1 380 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 TWSG1Q9GZX9 223 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 FKRPQ9H9S5 495 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 MMP25Q9NPA2 562 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 MYO18BQ8IUG5 2567 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 TSPAN2O60636 221 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 AK1P00568 194 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 LIMS3P0CW19 117 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 LIMS4P0CW20 117 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 APEHP13798 732 aaKnown RBP9.52□□□□□ -0.89
VPS11-208ENST00000621676 HK1P19367 917 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 PSMA1P25786 263 aaKnown RBP9.52□□□□□ -0.89
VPS11-208ENST00000621676 SLC6A6P31641 620 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 CSNK2BP67870 215 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 IGLV3-21P80748 117 aaPredicted RBP9.52□□□□□ -0.89
VPS11-208ENST00000621676 CACNA1DQ01668 2161 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 FOXC1Q12948 553 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 IL11RAQ14626 422 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 ZNF141Q15928 474 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 C1orf140Q5VVS0 124 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 LRFN4Q6PJG9 635 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 OR6V1Q8N148 313 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 NFAM1Q8NET5 270 aaPredicted RBP9.52□□□□□ -0.89
VPS11-208ENST00000621676 OR5W2Q8NH69 310 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 CEP19Q96LK0 163 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 OPALINQ96PE5 141 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 FUZQ9BT04 418 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 LRFN3Q9BTN0 628 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 TIGARQ9NQ88 270 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 LRFN1Q9P244 771 aa9.52□□□□□ -0.89
VPS11-208ENST00000621676 C19orf25Q9UFG5 118 aaPredicted RBP9.52□□□□□ -0.89
VPS11-208ENST00000621676 ASH1LQ9NR48 2969 aaKnown RBP9.52□□□□□ -0.89
VPS11-208ENST00000621676 IGKV1D-43A0A0B4J1Z2 117 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 A0A1W2PPL8 197 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 EFCAB10A6NFE3 127 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 TNFSF11O14788 317 aa9.51□□□□□ -0.89
VPS11-208ENST00000621676 RPS19P39019 145 aaKnown RBP9.51□□□□□ -0.89
VPS11-208ENST00000621676 ARFIP1P53367 373 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms