RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 WWP2O00308 870 aa19.52■□□□□ 0.71
SGMS1-210ENST00000619438 PTP4A3O75365 173 aa19.52■□□□□ 0.71
SGMS1-210ENST00000619438 OR2J2O76002 312 aa19.52■□□□□ 0.71
SGMS1-210ENST00000619438 SLC1A3P43003 542 aa19.52■□□□□ 0.71
SGMS1-210ENST00000619438 SSR4P51571 173 aa19.52■□□□□ 0.71
SGMS1-210ENST00000619438 LIPKQ5VXJ0 399 aa19.52■□□□□ 0.71
SGMS1-210ENST00000619438 SMARCD3Q6STE5 483 aa19.52■□□□□ 0.71
SGMS1-210ENST00000619438 C16orf47Q6ZP98 133 aaPredicted RBP19.52■□□□□ 0.71
SGMS1-210ENST00000619438 CXXC5Q7LFL8 322 aaKnown RBP19.52■□□□□ 0.71
SGMS1-210ENST00000619438 ARMC10Q8N2F6 343 aa19.52■□□□□ 0.71
SGMS1-210ENST00000619438 DRAXINQ8NBI3 349 aaPredicted RBP19.52■□□□□ 0.71
SGMS1-210ENST00000619438 TMEM178AQ8NBL3 297 aa19.52■□□□□ 0.71
SGMS1-210ENST00000619438 C16orf52Q8NHV5 167 aa19.52■□□□□ 0.71
SGMS1-210ENST00000619438 MEPEQ9NQ76 525 aaPredicted RBP19.52■□□□□ 0.71
SGMS1-210ENST00000619438 HINT3Q9NQE9 182 aaKnown RBP19.52■□□□□ 0.71
SGMS1-210ENST00000619438 H2AFY2Q9P0M6 372 aaPredicted RBP19.52■□□□□ 0.71
SGMS1-210ENST00000619438 CRNNQ9UBG3 495 aaPredicted RBP19.52■□□□□ 0.71
SGMS1-210ENST00000619438 ERVK-19Q9WJR5 959 aa19.52■□□□□ 0.71
SGMS1-210ENST00000619438 FLNBO75369 2602 aaKnown RBP19.51■□□□□ 0.71
SGMS1-210ENST00000619438 J3QRE1 110 aa19.51■□□□□ 0.71
SGMS1-210ENST00000619438 HCN1O60741 890 aa19.51■□□□□ 0.71
SGMS1-210ENST00000619438 SP1P08047 785 aa19.51■□□□□ 0.71
SGMS1-210ENST00000619438 COPZ1P61923 177 aa19.51■□□□□ 0.71
SGMS1-210ENST00000619438 SLC25A25Q6KCM7 469 aa19.51■□□□□ 0.71
SGMS1-210ENST00000619438 MDS2Q8NDY4 140 aa19.51■□□□□ 0.71
SGMS1-210ENST00000619438 OR8K3Q8NH51 312 aa19.51■□□□□ 0.71
SGMS1-210ENST00000619438 OR52N1Q8NH53 320 aa19.51■□□□□ 0.71
SGMS1-210ENST00000619438 ZNF649Q9BS31 505 aa19.51■□□□□ 0.71
SGMS1-210ENST00000619438 EXOSC4Q9NPD3 245 aaKnown RBP19.51■□□□□ 0.71
SGMS1-210ENST00000619438 CMC2Q9NRP2 79 aa19.51■□□□□ 0.71
SGMS1-210ENST00000619438 SF3B6Q9Y3B4 125 aaKnown RBP19.51■□□□□ 0.71
SGMS1-210ENST00000619438 PCDHGB6Q9Y5F9 930 aa19.51■□□□□ 0.71
SGMS1-210ENST00000619438 PNMA8CA0A1B0GUJ8 204 aa19.5■□□□□ 0.71
SGMS1-210ENST00000619438 SLC25A12O75746 678 aa19.5■□□□□ 0.71
SGMS1-210ENST00000619438 UPK1BO75841 260 aa19.5■□□□□ 0.71
SGMS1-210ENST00000619438 NEURL1O76050 574 aa19.5■□□□□ 0.71
SGMS1-210ENST00000619438 CRYABP02511 175 aaKnown RBP19.5■□□□□ 0.71
SGMS1-210ENST00000619438 CLPSP04118 112 aa19.5■□□□□ 0.71
SGMS1-210ENST00000619438 TSPAN19P0C672 248 aa19.5■□□□□ 0.71
SGMS1-210ENST00000619438 UQCRFS1P47985 274 aa19.5■□□□□ 0.71
SGMS1-210ENST00000619438 ZNF181Q2M3W8 571 aa19.5■□□□□ 0.71
SGMS1-210ENST00000619438 TRIM16LQ309B1 348 aa19.5■□□□□ 0.71
SGMS1-210ENST00000619438 CPOQ8IVL8 374 aa19.5■□□□□ 0.71
SGMS1-210ENST00000619438 ASB15Q8WXK1 588 aa19.5■□□□□ 0.71
SGMS1-210ENST00000619438 HES7Q9BYE0 225 aa19.5■□□□□ 0.71
SGMS1-210ENST00000619438 NUAK2Q9H093 628 aa19.5■□□□□ 0.71
SGMS1-210ENST00000619438 DAPK2Q9UIK4 370 aa19.5■□□□□ 0.71
SGMS1-210ENST00000619438 SPIN1Q9Y657 262 aaPredicted RBP19.5■□□□□ 0.71
SGMS1-210ENST00000619438 SLC2A10O95528 541 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 IL1AP01583 271 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 GAAP10253 952 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 MRPL49Q13405 166 aaKnown RBP19.49■□□□□ 0.71
SGMS1-210ENST00000619438 EIF2S3LQ2VIR3 472 aaKnown RBP19.49■□□□□ 0.71
SGMS1-210ENST00000619438 OR2G6Q5TZ20 316 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 NIPAL3Q6P499 406 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 ULK3Q6PHR2 472 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 CD200R1LQ6Q8B3 271 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 IL20RBQ6UXL0 311 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 SLC29A4Q7RTT9 530 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 GALNTL5Q7Z4T8 443 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 ZNF440Q8IYI8 595 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 FAM98AQ8NCA5 519 aaKnown RBP19.49■□□□□ 0.71
SGMS1-210ENST00000619438 PRR7Q8TB68 274 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 UFD1Q92890 307 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 TRMT61AQ96FX7 289 aaKnown RBP19.49■□□□□ 0.71
SGMS1-210ENST00000619438 TAAR6Q96RI8 345 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 MED18Q9BUE0 208 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 HPF1Q9NWY4 346 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 ANKUB1A6NFN9 424 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 TMEM200CA6NKL6 621 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 ADAM11O75078 769 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 SNX4O95219 450 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 IGKV3-11P04433 115 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 GABRA5P31644 462 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 RPS19P39019 145 aaKnown RBP19.49■□□□□ 0.71
SGMS1-210ENST00000619438 ADH7P40394 386 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 RFX3P48380 749 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 RORCP51449 518 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 MEPCEQ7L2J0 689 aaKnown RBP19.49■□□□□ 0.71
SGMS1-210ENST00000619438 CCDC190Q86UF4 302 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 ZNF614Q8N883 585 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 COQ7Q99807 217 aa19.49■□□□□ 0.71
SGMS1-210ENST00000619438 TXNL4BQ9NX01 149 aaKnown RBP19.49■□□□□ 0.71
SGMS1-210ENST00000619438 UTP20O75691 2785 aaKnown RBP19.48■□□□□ 0.71
SGMS1-210ENST00000619438 HTR3EA5X5Y0 456 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 SERINC4A6NH21 518 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 FGF9P31371 208 aaPredicted RBP19.48■□□□□ 0.71
SGMS1-210ENST00000619438 RNF144AP50876 292 aaPredicted RBP19.48■□□□□ 0.71
SGMS1-210ENST00000619438 ALG10BQ5I7T1 473 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 PLEKHG7Q6ZR37 379 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 ZNF554Q86TJ5 538 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 KLHL36Q8N4N3 616 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 BBS1Q8NFJ9 593 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 OR4F15Q8NGB8 312 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 OR13C2Q8NGS9 318 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 RNF217Q8TC41 542 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 GATAD2BQ8WXI9 593 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 SCMH1Q96GD3 660 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 GAL3ST4Q96RP7 486 aa19.48■□□□□ 0.71
SGMS1-210ENST00000619438 RASL10BQ96S79 203 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms