RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 SPATA9Q9BWV2 254 aa4.1□□□□□ -1.75
SYCP1-210ENST00000618516 CADM1Q9BY67 442 aaKnown RBP4.1□□□□□ -1.75
SYCP1-210ENST00000618516 OR2B2Q9GZK3 357 aa4.1□□□□□ -1.75
SYCP1-210ENST00000618516 ACTR6Q9GZN1 396 aa4.1□□□□□ -1.75
SYCP1-210ENST00000618516 CLEC4MQ9H2X3 399 aaPredicted RBP4.1□□□□□ -1.75
SYCP1-210ENST00000618516 DENND2DQ9H6A0 471 aaPredicted RBP4.1□□□□□ -1.75
SYCP1-210ENST00000618516 CRLF2Q9HC73 371 aa4.1□□□□□ -1.75
SYCP1-210ENST00000618516 SLC7A10Q9NS82 523 aa4.1□□□□□ -1.75
SYCP1-210ENST00000618516 SLC35F4A4IF30 521 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 TRAPPC13A5PLN9 417 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 ZNF726A6NNF4 738 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 A8MVM7 634 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 M0R1B8 84 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 PDLIM1O00151 329 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 CDC42EP2O14613 210 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 FFAR1O14842 300 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 ENTPD5O75356 428 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 GADD45GO95257 159 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 SLC2A10O95528 541 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 CST1P01037 141 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 IFNA14P01570 189 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 HLA-HP01893 362 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 ETS2P15036 469 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 CTSSP25774 331 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 MSX1P28360 303 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 MAGEA8P43361 318 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 IDH3GP51553 393 aaPredicted RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 CSNK2A1P68400 391 aaPredicted RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 CHRNB3Q05901 458 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 LTBQ06643 244 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 INAQ16352 499 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 SGCAQ16586 387 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 NSUN5P2Q63ZY6 315 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 PODNL1Q6PEZ8 512 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 MISPQ8IVT2 679 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 DND1Q8IYX4 353 aaKnown RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 C7orf57Q8NEG2 295 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 TMEM239Q8WW34 195 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 RASD2Q96D21 266 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 STARD4Q96DR4 205 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 WFIKKN1Q96NZ8 548 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 TNFRSF13CQ96RJ3 184 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 ENKD1Q9H0I2 346 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 TMEM38AQ9H6F2 299 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 WDR76Q9H967 626 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 SRA1Q9HD15 236 aaKnown RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 MEPEQ9NQ76 525 aaPredicted RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 ACER3Q9NUN7 267 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 KLHL9Q9P2J3 617 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 SLC7A8Q9UHI5 535 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 ING1Q9UK53 422 aaPredicted RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 POLR1DQ9Y2S0 133 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 MED31Q9Y3C7 131 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 A0A1W2PPL8 197 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 OR14I1A6ND48 311 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 FAM183AA6NL82 134 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 TNFSF13O75888 250 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 ZNF23P17027 643 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 GGT1P19440 569 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 AGTR1P30556 359 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 HOXC12P31275 282 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 PRKAR1BP31321 381 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 APOBEC1P41238 236 aaKnown RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 RAC3P60763 192 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 SPOCK1Q08629 439 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 KPNB1Q14974 876 aaKnown RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 SEC23BQ15437 767 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 GFOD2Q3B7J2 385 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 ZIK1Q3SY52 487 aaPredicted RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 SPATA46Q5T0L3 261 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 TMEM236Q5W0B7 351 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 SLC22A25Q6T423 547 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 LYPD4Q6UWN0 246 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 ARPINQ7Z6K5 226 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 ATG16L2Q8NAA4 619 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 OR4K5Q8NGD3 323 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 OR9Q1Q8NGQ5 310 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 OR4K13Q8NH42 304 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 IPCEF1Q8WWN9 437 aaPredicted RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 SLC7A6Q92536 515 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 KISS1RQ969F8 398 aaPredicted RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 CPNE4Q96A23 557 aaPredicted RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 SLC7A6OSQ96CW6 309 aaPredicted RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 BPIFA2Q96DR5 249 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 ZNF764Q96H86 408 aaPredicted RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 TM9SF2Q99805 663 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 SH3GL3Q99963 347 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 PSD2Q9BQI7 771 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 BTBD10Q9BSF8 475 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 CHID1Q9BWS9 393 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 EGLN3Q9H6Z9 239 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 ASB6Q9NWX5 421 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 TREM2Q9NZC2 230 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 NDUFAF4Q9P032 175 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 AASSQ9UDR5 926 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 LAMP3Q9UQV4 416 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 GPR52Q9Y2T5 361 aa4.09□□□□□ -1.75
SYCP1-210ENST00000618516 RRP15Q9Y3B9 282 aaKnown RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 SPIN1Q9Y657 262 aaPredicted RBP4.09□□□□□ -1.75
SYCP1-210ENST00000618516 NBEAL1Q6ZS30 2694 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms