RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 KDELR2P33947 212 aa12.69□□□□□ -0.38
TUBE1-208ENST00000604743 OR1E2P47887 323 aa12.69□□□□□ -0.38
TUBE1-208ENST00000604743 SELENOPP49908 381 aa12.69□□□□□ -0.38
TUBE1-208ENST00000604743 CLDN17P56750 224 aa12.69□□□□□ -0.38
TUBE1-208ENST00000604743 LTBQ06643 244 aa12.69□□□□□ -0.38
TUBE1-208ENST00000604743 ACKR1Q16570 336 aa12.69□□□□□ -0.38
TUBE1-208ENST00000604743 CYBRD1Q53TN4 286 aa12.69□□□□□ -0.38
TUBE1-208ENST00000604743 TIMM23BQ5SRD1 257 aa12.69□□□□□ -0.38
TUBE1-208ENST00000604743 SWT1Q5T5J6 900 aaKnown RBP12.69□□□□□ -0.38
TUBE1-208ENST00000604743 TTC33Q6PID6 262 aaPredicted RBP12.69□□□□□ -0.38
TUBE1-208ENST00000604743 WDR88Q6ZMY6 472 aa12.69□□□□□ -0.38
TUBE1-208ENST00000604743 ZNF704Q6ZNC4 412 aaPredicted RBP12.69□□□□□ -0.38
TUBE1-208ENST00000604743 H1FNTQ75WM6 255 aaPredicted RBP12.69□□□□□ -0.38
TUBE1-208ENST00000604743 TSPYL5Q86VY4 417 aaPredicted RBP12.69□□□□□ -0.38
TUBE1-208ENST00000604743 CMTM5Q96DZ9 223 aa12.69□□□□□ -0.38
TUBE1-208ENST00000604743 OXGR1Q96P68 337 aa12.69□□□□□ -0.38
TUBE1-208ENST00000604743 MOGAT1Q96PD6 335 aa12.69□□□□□ -0.38
TUBE1-208ENST00000604743 HOPXQ9BPY8 73 aaPredicted RBP12.69□□□□□ -0.38
TUBE1-208ENST00000604743 USB1Q9BQ65 265 aaKnown RBP12.69□□□□□ -0.38
TUBE1-208ENST00000604743 ASPNQ9BXN1 380 aa12.69□□□□□ -0.38
TUBE1-208ENST00000604743 MYLK2Q9H1R3 596 aa12.69□□□□□ -0.38
TUBE1-208ENST00000604743 ESRP2Q9H6T0 727 aaKnown RBP12.69□□□□□ -0.38
TUBE1-208ENST00000604743 ARID1AO14497 2285 aa12.69□□□□□ -0.38
TUBE1-208ENST00000604743 ITPR3Q14573 2671 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 TEP1Q99973 2627 aaKnown RBP12.68□□□□□ -0.38
TUBE1-208ENST00000604743 OR5H1A6NKK0 313 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 NME4O00746 187 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 SERPINI2O75830 405 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 CD3EP07766 207 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 TAS2R41P59536 307 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 PMS2P3Q13401 168 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 GABRA6Q16445 453 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 DEFB113Q30KQ7 82 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 NCMAPQ5T1S8 102 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 POMGNT2Q8NAT1 580 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 SLC41A3Q96GZ6 507 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 CCL19Q99731 98 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 FOXC2Q99958 501 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 TMEM43Q9BTV4 400 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 C1QTNF6Q9BXI9 259 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 B3GAT1Q9P2W7 334 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 B3GALT5Q9Y2C3 310 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 AP3M1Q9Y2T2 418 aa12.68□□□□□ -0.38
TUBE1-208ENST00000604743 DPRXA6NFQ7 191 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 MS4A18H0YCH9 400 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 PDLIM1O00151 329 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 UPK3AO75631 287 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 LYPD3O95274 346 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 CH25HO95992 272 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 HLA-DOBP13765 273 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 AHCYP23526 432 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 MPGP29372 298 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 PSME3P61289 254 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 BSPH1Q075Z2 132 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 MFSD13AQ14CX5 517 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 MS4A18Q3C1V0 323 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 OR7E24Q6IFN5 339 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 LINC00114Q6XXX2 140 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 P2RY8Q86VZ1 359 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 UEVLDQ8IX04 471 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 OR6S1Q8NH40 331 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 AKAP1Q92667 903 aaKnown RBP eCLIP12.67□□□□□ -0.38
TUBE1-208ENST00000604743 MUS81Q96NY9 551 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 ALKBH3Q96Q83 286 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-208ENST00000604743 ALG2Q9H553 416 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 NPAP1Q9NZP6 1156 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 RNF115Q9Y4L5 304 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 CORINQ9Y5Q5 1042 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 HIVEP1P15822 2718 aa12.67□□□□□ -0.38
TUBE1-208ENST00000604743 ZNF587BE7ETH6 402 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 C11orf98E9PRG8 122 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 CXCR6O00574 342 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 SLC43A1O75387 559 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 ZNF682O95780 498 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 HPRP00739 348 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 UMPSP11172 480 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 PRDX6P30041 224 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 HOXC12P31275 282 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 GSK3BP49841 420 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 ZNF83P51522 516 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 SELENOWP63302 87 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 TGFBR3Q03167 851 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 PIN1Q13526 163 aaPredicted RBP12.66□□□□□ -0.38
TUBE1-208ENST00000604743 CARD17Q5XLA6 110 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 ADAM5Q6NVV9 412 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 C8orf82Q6P1X6 216 aaPredicted RBP12.66□□□□□ -0.38
TUBE1-208ENST00000604743 SEZ6L2Q6UXD5 910 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 HACD2Q6Y1H2 254 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 SPNS3Q6ZMD2 512 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 ABHD12BQ7Z5M8 362 aaPredicted RBP12.66□□□□□ -0.38
TUBE1-208ENST00000604743 NKAIN4Q8IVV8 208 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 KBTBD8Q8NFY9 601 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 LZICQ8WZA0 190 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 NEUROG1Q92886 237 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 MBD6Q96DN6 1003 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 MPP4Q96JB8 637 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 ALPK1Q96QP1 1244 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 KCTD14Q9BQ13 255 aaPredicted RBP12.66□□□□□ -0.38
TUBE1-208ENST00000604743 TMEM204Q9BSN7 226 aa12.66□□□□□ -0.38
TUBE1-208ENST00000604743 EMC6Q9BV81 110 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms