RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 SCAIQ8N9R8 606 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 OR4K5Q8NGD3 323 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 MOSPD2Q8NHP6 518 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 RNF217Q8TC41 542 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 POP5Q969H6 163 aaKnown RBP9.38□□□□□ -0.91
LIG1-210ENST00000596332 SDCCAG3Q96C92 435 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 BPIFA2Q96DR5 249 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 SGTBQ96EQ0 304 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 TXNDC15Q96J42 360 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 LRGUKQ96M69 825 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 ZFP3Q96NJ6 502 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 TNFRSF13CQ96RJ3 184 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 SF3B5Q9BWJ5 86 aaKnown RBP9.38□□□□□ -0.91
LIG1-210ENST00000596332 TRIM15Q9C019 465 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 FKRPQ9H9S5 495 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 GP6Q9HCN6 339 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 CHST11Q9NPF2 352 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 ZNF229Q9UJW7 825 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 AURKCQ9UQB9 309 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 B3GALT5Q9Y2C3 310 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 MED31Q9Y3C7 131 aa9.38□□□□□ -0.91
LIG1-210ENST00000596332 FAM32AQ9Y421 112 aaKnown RBP9.38□□□□□ -0.91
LIG1-210ENST00000596332 MAGED1Q9Y5V3 778 aaPredicted RBP9.38□□□□□ -0.91
LIG1-210ENST00000596332 ADGRG4Q8IZF6 3080 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 NKX2-6A6NCS4 301 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 ENTPD5O75356 428 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 TIPRLO75663 272 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 GASTP01350 101 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 FCGR2AP12318 317 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 IFI30P13284 250 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 GRNP28799 593 aaKnown RBP9.37□□□□□ -0.91
LIG1-210ENST00000596332 CHRNB4P30926 498 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 FOXG1P55316 489 aaPredicted RBP9.37□□□□□ -0.91
LIG1-210ENST00000596332 SPIBQ01892 262 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 RNPS1Q15287 305 aaKnown RBP9.37□□□□□ -0.91
LIG1-210ENST00000596332 FBXL19-AS1Q494R0 122 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 OR2A2Q6IF42 318 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 C1orf94Q6P1W5 598 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 PGBD2Q6P3X8 592 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 XKRXQ6PP77 449 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 CYP4Z1Q86W10 505 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 ZNF808Q8N4W9 903 aaPredicted RBP9.37□□□□□ -0.91
LIG1-210ENST00000596332 ZNF610Q8N9Z0 462 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 OR9K2Q8NGE7 335 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 OR5J2Q8NH18 312 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 PIGXQ8TBF5 258 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 SSC4DQ8WTU2 575 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 OXGR1Q96P68 337 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 ALPK1Q96QP1 1244 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 EPYCQ99645 322 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 SFXN3Q9BWM7 321 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 MCCC2Q9HCC0 563 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 NPDC1Q9NQX5 325 aaPredicted RBP9.37□□□□□ -0.91
LIG1-210ENST00000596332 GLRX2Q9NS18 164 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 SELENONQ9NZV5 590 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 SIGLEC7Q9Y286 467 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 HIF3AQ9Y2N7 669 aa9.37□□□□□ -0.91
LIG1-210ENST00000596332 DIDO1Q9BTC0 2240 aaKnown RBP9.36□□□□□ -0.91
LIG1-210ENST00000596332 HTR3EA5X5Y0 456 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 PDLIM1O00151 329 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 TNFRSF11BO00300 401 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 CLOCKO15516 846 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 KRT36O76013 467 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 AGFG2O95081 481 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 CLDN14O95500 239 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 CST1P01037 141 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 CD8BP10966 210 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 IGFBP2P18065 325 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 BMP5P22003 454 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 PRKACGP22612 351 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 AQP2P41181 271 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 GPR4P46093 362 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 SIRPAP78324 504 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 RPL18Q07020 188 aaKnown RBP9.36□□□□□ -0.91
LIG1-210ENST00000596332 LGALS3BPQ08380 585 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 MFSD13AQ14CX5 517 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 ATP6AP1Q15904 470 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 FGD3Q5JSP0 725 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 MTFR2Q6P444 385 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 TFAP2EQ6VUC0 442 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 THSD4Q6ZMP0 1018 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 ZNF730Q6ZMV8 503 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 LINGO2Q7L985 606 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.36□□□□□ -0.91
LIG1-210ENST00000596332 MAMDC2Q7Z304 686 aaPredicted RBP9.36□□□□□ -0.91
LIG1-210ENST00000596332 P4HA3Q7Z4N8 544 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 KIF18BQ86Y91 864 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 TMEM123Q8N131 208 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 OR9Q2Q8NGE9 314 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 OR13C2Q8NGS9 318 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 OR6K3Q8NGY3 331 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 ASB5Q8WWX0 329 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 PYDC1Q8WXC3 89 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 LRTOMTQ8WZ04 291 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 TMEM45BQ96B21 275 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 FAM46AQ96IP4 442 aaKnown RBP9.36□□□□□ -0.91
LIG1-210ENST00000596332 NAA11Q9BSU3 229 aaPredicted RBP9.36□□□□□ -0.91
LIG1-210ENST00000596332 TAPBPLQ9BX59 468 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 PRRG4Q9BZD6 226 aa9.36□□□□□ -0.91
LIG1-210ENST00000596332 KLHL4Q9C0H6 718 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms