RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 CIB4A0PJX0 185 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 KRT33AO76009 404 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 IGHV3-9P01782 118 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 TCN1P20061 433 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 NTF4P34130 210 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 TGFBR3Q03167 851 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 LTBQ06643 244 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 FAPQ12884 760 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 OR7E24Q6IFN5 339 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 VTCN1Q7Z7D3 282 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 P2RY8Q86VZ1 359 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 EPHX4Q8IUS5 362 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 UEVLDQ8IX04 471 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 OR5J2Q8NH18 312 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 TMEM239Q8WW34 195 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 S100PBPQ96BU1 408 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 MUCL1Q96DR8 90 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 ZNF385AQ96PM9 386 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 PRSS27Q9BQR3 290 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 ZNF426Q9BUY5 554 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 FNDC11Q9BVV2 318 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 SLCO5A1Q9H2Y9 848 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 FKRPQ9H9S5 495 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 NANSQ9NR45 359 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 DCAF13Q9NV06 445 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 TAS2R16Q9NYV7 291 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 CD300AQ9UGN4 299 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 RCE1Q9Y256 329 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 FAM32AQ9Y421 112 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 NOX1Q9Y5S8 564 aa15.27■□□□□ 0.04
SHKBP1-212ENST00000596163 CACNA1DQ01668 2161 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 LYZL6O75951 148 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 CH25HO95992 272 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 IGF2P01344 180 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 MT-ND1P03886 318 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 COX5AP20674 150 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 IGHV1-2P23083 117 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 CLDN17P56750 224 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 ZNF74Q16587 644 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 BEX5Q5H9J7 111 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 NIPAL3Q6P499 406 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 WDR88Q6ZMY6 472 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 TSPYL5Q86VY4 417 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 KDM8Q8N371 416 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 ZNF433Q8N7K0 673 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 AMBRA1Q9C0C7 1298 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 ZNF229Q9UJW7 825 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 MED31Q9Y3C7 131 aa15.26■□□□□ 0.03
SHKBP1-212ENST00000596163 MS4A18H0YCH9 400 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 KPNA4O00629 521 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 PLPP3O14495 311 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 HRGP04196 525 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 UMPSP11172 480 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 PTNP21246 168 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 AHCYP23526 432 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 EDNRAP25101 427 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 DNAJA1P31689 397 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 NR1H2P55055 460 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 KRTAP10-9P60411 292 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 PUDPQ08623 228 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 TRAM2Q15035 370 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 TSC22D1Q15714 1073 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 FXNQ16595 210 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 MS4A18Q3C1V0 323 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 TIMM23BQ5SRD1 257 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 C1QTNF12Q5T7M4 302 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 TSPO2Q5TGU0 170 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 TRPM8Q7Z2W7 1104 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 PXKQ7Z7A4 578 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 LSRQ86X29 649 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 CDC20BQ86Y33 519 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 WFDC8Q8IUA0 241 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 NKAIN4Q8IVV8 208 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 FAM156AQ8NDB6 213 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 NSMCE2Q96MF7 247 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 MOGAT1Q96PD6 335 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 SLC7A10Q9NS82 523 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 SEC14L4Q9UDX3 406 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 A4GNTQ9UNA3 340 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 SNX13Q9Y5W8 968 aa15.25■□□□□ 0.03
SHKBP1-212ENST00000596163 SLC43A1O75387 559 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 THBDP07204 575 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 ADORA3P0DMS8 318 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 ITGA2P17301 1181 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 MPGP29372 298 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 YAP1P46937 504 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 SELENOPP49908 381 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 ZP4Q12836 540 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 STK11Q15831 433 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 OFCC1Q8IZS5 231 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 RBM15BQ8NDT2 890 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 PIK3C3Q8NEB9 887 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 C1orf162Q8NEQ5 155 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 TMEM255BQ8WV15 326 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 SGTBQ96EQ0 304 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 PIK3IP1Q96FE7 263 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 PYURFQ96I23 114 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 LINC00470Q9BZP3 86 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 C1orf21Q9H246 121 aa15.24■□□□□ 0.03
SHKBP1-212ENST00000596163 B3GAT1Q9P2W7 334 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms