RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 ST3GAL3Q11203 375 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 AAED1Q7RTV5 226 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 TRPM8Q7Z2W7 1104 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 UBE2J2Q8N2K1 259 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 C10orf53Q8N6V4 93 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 ZIC4Q8N9L1 334 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 FAM156AQ8NDB6 213 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 RBM15BQ8NDT2 890 aaKnown RBP10.52□□□□□ -0.73
LIG3-213ENST00000590630 HS6ST2Q96MM7 605 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 OXGR1Q96P68 337 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 MOGAT1Q96PD6 335 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 ZNF385AQ96PM9 386 aaKnown RBP10.52□□□□□ -0.73
LIG3-213ENST00000590630 PRSS27Q9BQR3 290 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 AMBRA1Q9C0C7 1298 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 ACTR6Q9GZN1 396 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 FKRPQ9H9S5 495 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 RASSF1Q9NS23 344 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 DCAF13Q9NV06 445 aaKnown RBP10.52□□□□□ -0.73
LIG3-213ENST00000590630 ASB6Q9NWX5 421 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 MRPL39Q9NYK5 338 aaKnown RBP10.52□□□□□ -0.73
LIG3-213ENST00000590630 B3GAT1Q9P2W7 334 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 SEC14L4Q9UDX3 406 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 CCDC168Q8NDH2 2452 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 MAP1AP78559 2803 aaPredicted RBP10.51□□□□□ -0.73
LIG3-213ENST00000590630 KPNA4O00629 521 aaPredicted RBP10.51□□□□□ -0.73
LIG3-213ENST00000590630 IGHV3-9P01782 118 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 MT-ND1P03886 318 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 T-ENOLP0DO92 83 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 CBLP22681 906 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 CRYGSP22914 178 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 LTBQ06643 244 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 PUDPQ08623 228 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 PMS2P3Q13401 168 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 ZNF74Q16587 644 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 ANKRD34AQ69YU3 496 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 BHLHA15Q7RTS1 189 aaPredicted RBP10.51□□□□□ -0.73
LIG3-213ENST00000590630 SSX8Q7RTT4 187 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.51□□□□□ -0.73
LIG3-213ENST00000590630 EPHX4Q8IUS5 362 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 NKAIN4Q8IVV8 208 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 OFCC1Q8IZS5 231 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 POMGNT2Q8NAT1 580 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 OR5J2Q8NH18 312 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 TMEM239Q8WW34 195 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 S100PBPQ96BU1 408 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 LURAP1Q96LR2 239 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 FNDC11Q9BVV2 318 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 POLDIP3Q9BY77 421 aaKnown RBP10.51□□□□□ -0.73
LIG3-213ENST00000590630 C1orf21Q9H246 121 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 CLEC4MQ9H2X3 399 aaPredicted RBP10.51□□□□□ -0.73
LIG3-213ENST00000590630 SLCO5A1Q9H2Y9 848 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 NANSQ9NR45 359 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 TAS2R16Q9NYV7 291 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 UPB1Q9UBR1 384 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 ZNF229Q9UJW7 825 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 A4GNTQ9UNA3 340 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 RCE1Q9Y256 329 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 NOX1Q9Y5S8 564 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 SNX13Q9Y5W8 968 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 OTOGQ6ZRI0 2925 aa10.51□□□□□ -0.73
LIG3-213ENST00000590630 MYO9AB2RTY4 2548 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 ROS1P08922 2347 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 HTR3EA5X5Y0 456 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 PLPP3O14495 311 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 ARPC2O15144 300 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 AKAP8O43823 692 aaKnown RBP10.5□□□□□ -0.73
LIG3-213ENST00000590630 LYZL6O75951 148 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 CH25HO95992 272 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 IGHV1-2P23083 117 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 IL1RL1Q01638 556 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 FAPQ12884 760 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 C1DQ13901 141 aaKnown RBP10.5□□□□□ -0.73
LIG3-213ENST00000590630 FBXW10Q5XX13 1052 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 ABHD12BQ7Z5M8 362 aaPredicted RBP10.5□□□□□ -0.73
LIG3-213ENST00000590630 PXKQ7Z7A4 578 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 P2RY8Q86VZ1 359 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 CYP4Z1Q86W10 505 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 UEVLDQ8IX04 471 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 KDM8Q8N371 416 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 ZNF433Q8N7K0 673 aaPredicted RBP10.5□□□□□ -0.73
LIG3-213ENST00000590630 TMEM255BQ8WV15 326 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 HSD17B8Q92506 261 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 ZC3HAV1LQ96H79 300 aaKnown RBP10.5□□□□□ -0.73
LIG3-213ENST00000590630 NSMCE2Q96MF7 247 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 MEPEQ9NQ76 525 aaPredicted RBP10.5□□□□□ -0.73
LIG3-213ENST00000590630 SLC7A10Q9NS82 523 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 PRPF19Q9UMS4 504 aaKnown RBP10.5□□□□□ -0.73
LIG3-213ENST00000590630 MED31Q9Y3C7 131 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 ENPP4Q9Y6X5 453 aa10.5□□□□□ -0.73
LIG3-213ENST00000590630 ENO4A6NNW6 628 aa10.49□□□□□ -0.73
LIG3-213ENST00000590630 LRRN3E7EW58 273 aa10.49□□□□□ -0.73
LIG3-213ENST00000590630 MS4A18H0YCH9 400 aa10.49□□□□□ -0.73
LIG3-213ENST00000590630 PDLIM1O00151 329 aa10.49□□□□□ -0.73
LIG3-213ENST00000590630 FFAR1O14842 300 aa10.49□□□□□ -0.73
LIG3-213ENST00000590630 TRAF3IP2O43734 574 aaPredicted RBP10.49□□□□□ -0.73
LIG3-213ENST00000590630 KRT33AO76009 404 aa10.49□□□□□ -0.73
LIG3-213ENST00000590630 ZNF432O94892 652 aa10.49□□□□□ -0.73
LIG3-213ENST00000590630 OR6A2O95222 327 aa10.49□□□□□ -0.73
LIG3-213ENST00000590630 HPRP00739 348 aa10.49□□□□□ -0.73
LIG3-213ENST00000590630 HRGP04196 525 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms