RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 CXXC4Q9H2H0 198 aa8.68□□□□□ -1.02
PTPN2-208ENST00000589216 SLCO5A1Q9H2Y9 848 aa8.68□□□□□ -1.02
PTPN2-208ENST00000589216 TMEM27Q9HBJ8 222 aa8.68□□□□□ -1.02
PTPN2-208ENST00000589216 GID8Q9NWU2 228 aa8.68□□□□□ -1.02
PTPN2-208ENST00000589216 ASB6Q9NWX5 421 aa8.68□□□□□ -1.02
PTPN2-208ENST00000589216 PRDM4Q9UKN5 801 aa8.68□□□□□ -1.02
PTPN2-208ENST00000589216 SLC7A7Q9UM01 511 aa8.68□□□□□ -1.02
PTPN2-208ENST00000589216 SH3GLB1Q9Y371 365 aa8.68□□□□□ -1.02
PTPN2-208ENST00000589216 TRAPPC13A5PLN9 417 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 GMNCA6NCL1 334 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 DPRXA6NFQ7 191 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 UPK3AO75631 287 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 NCK1P16333 377 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 GGT1P19440 569 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 DNASE1P24855 282 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 GTF2E2P29084 291 aaKnown RBP8.67□□□□□ -1.02
PTPN2-208ENST00000589216 GSK3BP49841 420 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 CLDN17P56750 224 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 BSPH1Q075Z2 132 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 KEAP1Q14145 624 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 PPA1Q15181 289 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 GABRA6Q16445 453 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 DEFB113Q30KQ7 82 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 NCMAPQ5T1S8 102 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 TMEM225Q6GV28 225 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 ADAM5Q6NVV9 412 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 NIPAL3Q6P499 406 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 ZNF613Q6PF04 617 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 C5orf46Q6UWT4 87 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 SPNS3Q6ZMD2 512 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 DEF8Q6ZN54 512 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 SLC46A3Q7Z3Q1 461 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 VTCN1Q7Z7D3 282 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 TMEM123Q8N131 208 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 KBTBD8Q8NFY9 601 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 OR52N5Q8NH56 324 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 SLC26A7Q8TE54 656 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 IGFBPL1Q8WX77 278 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 TMEM43Q9BTV4 400 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 KRTAP3-2Q9BYR7 98 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 NELFAQ9H3P2 528 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 FANCFQ9NPI8 374 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 MEPEQ9NQ76 525 aaPredicted RBP8.67□□□□□ -1.02
PTPN2-208ENST00000589216 TAS2R16Q9NYV7 291 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 ABCD2Q9UBJ2 740 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 RASD1Q9Y272 281 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 SNX13Q9Y5W8 968 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 SLC25A15Q9Y619 301 aa8.67□□□□□ -1.02
PTPN2-208ENST00000589216 NSD1Q96L73 2696 aaPredicted RBP8.66□□□□□ -1.02
PTPN2-208ENST00000589216 CIB4A0PJX0 185 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 ELOVL7A1L3X0 281 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 DYNC1I1O14576 645 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 CLOCKO15516 846 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 OR2T1O43869 369 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 PIP5K1CO60331 668 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 ZNF432O94892 652 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 CDH2P19022 906 aaPredicted RBP8.66□□□□□ -1.02
PTPN2-208ENST00000589216 KDELR2P33947 212 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 UGT2B15P54855 530 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 NR1H2P55055 460 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 PSME3P61289 254 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 LSM11P83369 360 aaKnown RBP eCLIP8.66□□□□□ -1.02
PTPN2-208ENST00000589216 POU3F1Q03052 451 aaPredicted RBP8.66□□□□□ -1.02
PTPN2-208ENST00000589216 PIN1Q13526 163 aaPredicted RBP8.66□□□□□ -1.02
PTPN2-208ENST00000589216 HIKESHIQ53FT3 197 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 TIMM23BQ5SRD1 257 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 PHYHD1Q5SRE7 291 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 NHLRC1Q6VVB1 395 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 HACD2Q6Y1H2 254 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 ARPINQ7Z6K5 226 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 CPLX4Q7Z7G2 160 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 NKAIN4Q8IVV8 208 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 LRRC17Q8N6Y2 441 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 RNF148Q8N7C7 305 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 WDR31Q8NA23 367 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 ADPRHL1Q8NDY3 354 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 PFN4Q8NHR9 129 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 TMEM255BQ8WV15 326 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 HSD17B8Q92506 261 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 PROX1Q92786 737 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 MBD6Q96DN6 1003 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 ZNF837Q96EG3 531 aaPredicted RBP8.66□□□□□ -1.02
PTPN2-208ENST00000589216 TPD52L3Q96J77 140 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 ALPK1Q96QP1 1244 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 OR2M2Q96R28 347 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 FOXC2Q99958 501 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 HDHD5Q9BXW7 423 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 ALG2Q9H553 416 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 EVA1AQ9H8M9 152 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 ARL8BQ9NVJ2 186 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 MED29Q9NX70 200 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 SELENONQ9NZV5 590 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 UPB1Q9UBR1 384 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 RNF115Q9Y4L5 304 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 TLN2Q9Y4G6 2542 aa8.66□□□□□ -1.02
PTPN2-208ENST00000589216 SHISA9B4DS77 424 aa8.65□□□□□ -1.02
PTPN2-208ENST00000589216 MS4A18H0YCH9 400 aa8.65□□□□□ -1.02
PTPN2-208ENST00000589216 CXCR6O00574 342 aa8.65□□□□□ -1.02
PTPN2-208ENST00000589216 HS3ST1O14792 307 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms