RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 UBQLN3Q9H347 655 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 TIGARQ9NQ88 270 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 KLRF1Q9NZS2 232 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 SIGLEC7Q9Y286 467 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 IGKV1D-42A0A075B6H8 117 aa18.39■□□□□ 0.53
SMG8-203ENST00000578922 SDC2P34741 201 aa18.39■□□□□ 0.53
SMG8-203ENST00000578922 COL28A1Q2UY09 1125 aa18.39■□□□□ 0.53
SMG8-203ENST00000578922 GXYLT1Q4G148 440 aa18.39■□□□□ 0.53
SMG8-203ENST00000578922 ARHGAP9Q9BRR9 750 aa18.39■□□□□ 0.53
SMG8-203ENST00000578922 CNOT1A5YKK6 2376 aaKnown RBP18.39■□□□□ 0.53
SMG8-203ENST00000578922 MEIOCA2RUB1 952 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 TMCC2O75069 709 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 BMP7P18075 431 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 DLSTP36957 453 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 NBL1P41271 181 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 P2RX1P51575 399 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 CBFBQ13951 182 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 CRTC2Q53ET0 693 aaPredicted RBP18.38■□□□□ 0.53
SMG8-203ENST00000578922 SLC35F1Q5T1Q4 408 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 ESX1Q8N693 406 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 C10orf53Q8N6V4 93 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 OR52L1Q8NGH7 329 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 BRIX1Q8TDN6 353 aaKnown RBP18.38■□□□□ 0.53
SMG8-203ENST00000578922 TM9SF4Q92544 642 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 SGTBQ96EQ0 304 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 MED17Q9NVC6 651 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 MRPS18BQ9Y676 258 aaKnown RBP18.38■□□□□ 0.53
SMG8-203ENST00000578922 MPDZO75970 2070 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 TRDV1A0A1B0GX56 115 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 CCDC182A6NF36 153 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 B4DXG7 233 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 CSF3P09919 207 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 RAB40ALP0C0E4 278 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 PNMTP11086 282 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 PGCP20142 388 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 AZGP1P25311 298 aaKnown RBP18.38■□□□□ 0.53
SMG8-203ENST00000578922 PTBP1P26599 531 aaKnown RBP eCLIP18.38■□□□□ 0.53
SMG8-203ENST00000578922 RPS25P62851 125 aaKnown RBP18.38■□□□□ 0.53
SMG8-203ENST00000578922 PPP3R1P63098 170 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 DBPQ10586 325 aaPredicted RBP18.38■□□□□ 0.53
SMG8-203ENST00000578922 QPRTQ15274 297 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 ZFP69Q49AA0 526 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 METAP1DQ6UB28 335 aaPredicted RBP18.38■□□□□ 0.53
SMG8-203ENST00000578922 RDH10Q8IZV5 341 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 NLGN4YQ8NFZ3 816 aaPredicted RBP18.38■□□□□ 0.53
SMG8-203ENST00000578922 M1APQ8TC57 530 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 TMEM203Q969S6 136 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 OTULINQ96BN8 352 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 ST6GAL2Q96JF0 529 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 PRRX2Q99811 253 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 KATNB1Q9BVA0 655 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 IFT27Q9BW83 186 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 MMP25Q9NPA2 562 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 WDR70Q9NW82 654 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 FBXL4Q9UKA2 621 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 HRH3Q9Y5N1 445 aa18.38■□□□□ 0.53
SMG8-203ENST00000578922 CENPXA8MT69 81 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 SURF4O15260 269 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 IGHEP01854 428 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 CD63P08962 238 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 FBXO45P0C2W1 286 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 ACSM1Q08AH1 577 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 OR2G6Q5TZ20 316 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 IL20RBQ6UXL0 311 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 NUP54Q7Z3B4 507 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 SLC7A5P1Q8MH63 180 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 ZNF485Q8NCK3 441 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 GATAD2BQ8WXI9 593 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 CDCP1Q9H5V8 836 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 METTL7AQ9H8H3 244 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 MED11Q9P086 117 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 HCN1O60741 890 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 PTP4A3O75365 173 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 RCBTB2O95199 551 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 CLEC2LP0C7M8 214 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 LIMS3P0CW19 117 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 LIMS4P0CW20 117 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 GP1BBP13224 206 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 NAGAP17050 411 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 TGM4P49221 684 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 SSPNQ14714 243 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 GPR119Q8TDV5 335 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 SPACA9Q96E40 222 aaPredicted RBP18.37■□□□□ 0.53
SMG8-203ENST00000578922 ADAM19Q9H013 955 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 MCCC2Q9HCC0 563 aa18.37■□□□□ 0.53
SMG8-203ENST00000578922 DDX28Q9NUL7 540 aaKnown RBP18.37■□□□□ 0.53
SMG8-203ENST00000578922 IL10RAQ13651 578 aa18.36■□□□□ 0.53
SMG8-203ENST00000578922 TTC9Q92623 222 aa18.36■□□□□ 0.53
SMG8-203ENST00000578922 CELSR3Q9NYQ7 3312 aa18.36■□□□□ 0.53
SMG8-203ENST00000578922 FAM183AA6NL82 134 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 BHLHE40O14503 412 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 CXCR1P25024 350 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 RCVRNP35243 200 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 EGR4Q05215 589 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 C17orf67Q0P5P2 114 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 FHL1Q13642 323 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 INPP5JQ15735 1006 aaPredicted RBP18.35■□□□□ 0.53
SMG8-203ENST00000578922 KTI12Q96EK9 354 aaPredicted RBP18.35■□□□□ 0.53
SMG8-203ENST00000578922 TAS2R10Q9NYW0 307 aa18.35■□□□□ 0.53
SMG8-203ENST00000578922 LOC101059948A0A1B0GTJ6 334 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms