RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 KRT33AO76009 404 aa20.71■□□□□ 0.91
SNF8-217ENST00000576353 THY1P04216 161 aa20.71■□□□□ 0.91
SNF8-217ENST00000576353 OR1E2P47887 323 aa20.71■□□□□ 0.91
SNF8-217ENST00000576353 TAS2R41P59536 307 aa20.71■□□□□ 0.91
SNF8-217ENST00000576353 IL1RL1Q01638 556 aa20.71■□□□□ 0.91
SNF8-217ENST00000576353 TGFBR3Q03167 851 aa20.71■□□□□ 0.91
SNF8-217ENST00000576353 LTBQ06643 244 aa20.71■□□□□ 0.91
SNF8-217ENST00000576353 OR7E24Q6IFN5 339 aa20.71■□□□□ 0.91
SNF8-217ENST00000576353 PAMR1Q6UXH9 720 aa20.71■□□□□ 0.91
SNF8-217ENST00000576353 MRPL39Q9NYK5 338 aaKnown RBP20.71■□□□□ 0.91
SNF8-217ENST00000576353 SEC14L4Q9UDX3 406 aa20.71■□□□□ 0.91
SNF8-217ENST00000576353 TAGLN3Q9UI15 199 aa20.71■□□□□ 0.91
SNF8-217ENST00000576353 PLEKHA6Q9Y2H5 1048 aa20.71■□□□□ 0.91
SNF8-217ENST00000576353 ANKRD17O75179 2603 aaKnown RBP20.7■□□□□ 0.9
SNF8-217ENST00000576353 CSMD2Q7Z408 3487 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 OR5H1A6NKK0 313 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 PDLIM1O00151 329 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 RAD51DO75771 328 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 OR5F1O95221 314 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 RAF1P04049 648 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 PTNP21246 168 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 LOXP28300 417 aaPredicted RBP20.7■□□□□ 0.9
SNF8-217ENST00000576353 IST1P53990 364 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 PMS2P3Q13401 168 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 KEAP1Q14145 624 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 PPA1Q15181 289 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 GKAP1Q5VSY0 366 aaPredicted RBP20.7■□□□□ 0.9
SNF8-217ENST00000576353 NIPAL3Q6P499 406 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 WDR88Q6ZMY6 472 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 TSPYL5Q86VY4 417 aaPredicted RBP20.7■□□□□ 0.9
SNF8-217ENST00000576353 PLPPR2Q96GM1 343 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 MUS81Q96NY9 551 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 MOGAT1Q96PD6 335 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 HS3ST6Q96QI5 342 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 ZNF426Q9BUY5 554 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 ESRP2Q9H6T0 727 aaKnown RBP20.7■□□□□ 0.9
SNF8-217ENST00000576353 ADA2Q9NZK5 511 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 B3GAT1Q9P2W7 334 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 RCE1Q9Y256 329 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 CCDC168Q8NDH2 2452 aa20.7■□□□□ 0.9
SNF8-217ENST00000576353 FAM107AO95990 144 aa20.69■□□□□ 0.9
SNF8-217ENST00000576353 ITGA5P08648 1049 aa20.69■□□□□ 0.9
SNF8-217ENST00000576353 THRBP10828 461 aa20.69■□□□□ 0.9
SNF8-217ENST00000576353 MPGP29372 298 aa20.69■□□□□ 0.9
SNF8-217ENST00000576353 IFNA8P32881 189 aa20.69■□□□□ 0.9
SNF8-217ENST00000576353 SELENOPP49908 381 aa20.69■□□□□ 0.9
SNF8-217ENST00000576353 CLDN17P56750 224 aa20.69■□□□□ 0.9
SNF8-217ENST00000576353 C1orf162Q8NEQ5 155 aaPredicted RBP20.69■□□□□ 0.9
SNF8-217ENST00000576353 CCM2LQ9NUG4 571 aaPredicted RBP20.69■□□□□ 0.9
SNF8-217ENST00000576353 RIMS3Q9UJD0 308 aa20.69■□□□□ 0.9
SNF8-217ENST00000576353 MS4A18H0YCH9 400 aa20.68■□□□□ 0.9
SNF8-217ENST00000576353 AKAP8O43823 692 aaKnown RBP20.68■□□□□ 0.9
SNF8-217ENST00000576353 SHOX2O60902 331 aaPredicted RBP20.68■□□□□ 0.9
SNF8-217ENST00000576353 ZNF682O95780 498 aa20.68■□□□□ 0.9
SNF8-217ENST00000576353 RBM34P42696 430 aaKnown RBP20.68■□□□□ 0.9
SNF8-217ENST00000576353 PIN1Q13526 163 aaPredicted RBP20.68■□□□□ 0.9
SNF8-217ENST00000576353 GABRA6Q16445 453 aa20.68■□□□□ 0.9
SNF8-217ENST00000576353 ZNF74Q16587 644 aa20.68■□□□□ 0.9
SNF8-217ENST00000576353 MS4A18Q3C1V0 323 aa20.68■□□□□ 0.9
SNF8-217ENST00000576353 CBLL1Q75N03 491 aa20.68■□□□□ 0.9
SNF8-217ENST00000576353 UEVLDQ8IX04 471 aa20.68■□□□□ 0.9
SNF8-217ENST00000576353 FAM162AQ96A26 154 aa20.68■□□□□ 0.9
SNF8-217ENST00000576353 PRSS27Q9BQR3 290 aa20.68■□□□□ 0.9
SNF8-217ENST00000576353 ARL8BQ9NVJ2 186 aa20.68■□□□□ 0.9
SNF8-217ENST00000576353 NOX1Q9Y5S8 564 aa20.68■□□□□ 0.9
SNF8-217ENST00000576353 ZNF587BE7ETH6 402 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 LRRN3E7EW58 273 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 PLPP3O14495 311 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 GMNNO75496 209 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 CH25HO95992 272 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 MNAT1P51948 309 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 FOXG1P55316 489 aaPredicted RBP20.67■□□□□ 0.9
SNF8-217ENST00000576353 PUDPQ08623 228 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 C1QTNF12Q5T7M4 302 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 C17orf78Q8N4C9 275 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 OR5J2Q8NH18 312 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 MBD6Q96DN6 1003 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 HS6ST2Q96MM7 605 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 TMEM204Q9BSN7 226 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 LINC00470Q9BZP3 86 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 AMBRA1Q9C0C7 1298 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 FKRPQ9H9S5 495 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 NANSQ9NR45 359 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 NDE1Q9NXR1 346 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 FAM53CQ9NYF3 392 aa20.67■□□□□ 0.9
SNF8-217ENST00000576353 AKAP6Q13023 2319 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 KPNA4O00629 521 aaPredicted RBP20.66■□□□□ 0.9
SNF8-217ENST00000576353 SLC43A1O75387 559 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 ZNF432O94892 652 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 OR6A2O95222 327 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 ATE1O95260 518 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 SERPINA1P01009 418 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 HIST1H2ABP04908 130 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 IFNW1P05000 195 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 ART1P52961 327 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 ST3GAL3Q11203 375 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 ACKR1Q16570 336 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 IFI44LQ53G44 452 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 NCMAPQ5T1S8 102 aa20.66■□□□□ 0.9
SNF8-217ENST00000576353 C9orf135Q5VTT2 229 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms