RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 CPNE4Q96A23 557 aaPredicted RBP5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 TADA1Q96BN2 335 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 ECHDC3Q96DC8 303 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 DNAJA3Q96EY1 480 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 AKR1E2Q96JD6 320 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 ZNF514Q96K75 400 aaPredicted RBP5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 C9orf72Q96LT7 481 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 ZNF607Q96SK3 696 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 TUBGCP2Q9BSJ2 902 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 IL22Q9GZX6 179 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 COMMD4Q9H0A8 199 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 OR51B6Q9H340 312 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 LRRN3Q9H3W5 708 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 GPN2Q9H9Y4 310 aaPredicted RBP5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 AMBNQ9NP70 447 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 TREX1Q9NSU2 369 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 MRPL22Q9NWU5 206 aaKnown RBP5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 UVRAGQ9P2Y5 699 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 GALPQ9UBC7 116 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 CHRNA9Q9UGM1 479 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 NAGKQ9UJ70 344 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 ERCC6Q03468 1493 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 RTL9Q8NET4 1388 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 PLEKHG1Q9ULL1 1385 aa5.04□□□□□ -1.6
TOM1L1-222ENST00000575909 RAB19A4D1S5 217 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 HELTA6NFD8 242 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 E9PAM4 449 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 CASKO14936 926 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 TM9SF1O15321 606 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 HCN1O60741 890 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 RAMP1O60894 148 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 GPX5O75715 221 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 IL1BP01584 269 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 MBP02144 154 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 CCL2P13500 99 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 SRMP19623 302 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 WARSP23381 471 aaKnown RBP5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 TEAD1P28347 426 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 KCNJ3P48549 501 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 TGM4P49221 684 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 CDC34P49427 236 aaPredicted RBP5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 AP2S1P53680 142 aaPredicted RBP5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 EMP2P54851 167 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 CD300CQ08708 224 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 TMED2Q15363 201 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 CYTH1Q15438 398 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 UBE2V2Q15819 145 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 C17orf58Q2M2W7 97 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 MRGPRG-AS1Q2M3A8 158 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 TMEM44Q2T9K0 475 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 CHRFAM7AQ494W8 412 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 C14orf28Q4W4Y0 310 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 TEX44Q53QW1 395 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 CDKL4Q5MAI5 379 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 C6orf183Q5T699 404 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 SEL1L2Q5TEA6 688 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 SEL1L3Q68CR1 1132 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 SPOPLQ6IQ16 392 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 SLC25A25Q6KCM7 469 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 ANKRD26P1Q6NSI1 321 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 EIF3MQ7L2H7 374 aaKnown RBP5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 PAGE2Q7Z2X7 111 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 ABHD12BQ7Z5M8 362 aaPredicted RBP5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 PAQR7Q86WK9 346 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 FBXL16Q8N461 479 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 PNPT1Q8TCS8 783 aaKnown RBP5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 DTX3LQ8TDB6 740 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 TCP10LQ8TDR4 215 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 CRYGNQ8WXF5 182 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 MRGPRFQ96AM1 343 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 RAB3CQ96E17 227 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 SLC41A3Q96GZ6 507 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 PSMB7Q99436 277 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 SLC30A2Q9BRI3 323 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 RPP25Q9BUL9 199 aaKnown RBP5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 POTEKPQ9BYX7 375 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 ZYG11BQ9C0D3 744 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 ALX4Q9H161 411 aaPredicted RBP5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 SLC25A51Q9H1U9 297 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 FN3KRPQ9HA64 309 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 FOLH1BQ9HBA9 442 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 MRPL47Q9HD33 250 aaKnown RBP5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 MYOZ1Q9NP98 299 aaPredicted RBP5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 ASCL3Q9NQ33 180 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 CTPS2Q9NRF8 586 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 ZNF275Q9NSD4 429 aaPredicted RBP5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 CD274Q9NZQ7 290 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 ENPP5Q9UJA9 477 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 ERVW-1Q9UQF0 538 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 ARL2BPQ9Y2Y0 163 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 MOB4Q9Y3A3 225 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 SOGA1O94964 1423 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 PTCH1Q13635 1447 aa5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 POLR3AO14802 1390 aaPredicted RBP5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 EIF3AQ14152 1382 aaKnown RBP5.03□□□□□ -1.6
TOM1L1-222ENST00000575909 IGHV3OR16-12A0A075B7B8 117 aa5.02□□□□□ -1.61
TOM1L1-222ENST00000575909 PPIAL4CA0A0B4J2A2 164 aa5.02□□□□□ -1.61
TOM1L1-222ENST00000575909 A0A0J9YWU9 116 aa5.02□□□□□ -1.61
TOM1L1-222ENST00000575909 A0A1W2PPV4 95 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms