RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 ZFP64Q9NPA5 681 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 DLL4Q9NR61 685 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 NPFFR2Q9Y5X5 522 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 ALPK3Q96L96 1907 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 OR6C68A6NDL8 312 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 ADAM11O75078 769 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 ZFPL1O95159 310 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 NGFRP08138 427 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 LINC00303Q3SY05 128 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 LRRC69Q6ZNQ3 347 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 TOR1AIP2Q8NFQ8 470 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 WDR89Q96FK6 387 aaPredicted RBP14.06□□□□□ -0.16
USP43-202ENST00000570475 C10orf90Q96M02 699 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 OR2A5Q96R48 311 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.06□□□□□ -0.16
USP43-202ENST00000570475 COPZ2Q9P299 210 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 APBB3O95704 486 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 APOC3P02656 99 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 OR2T7P0C7T2 308 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 C4BPBP20851 252 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 THBS2P35442 1172 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 DEFA5Q01523 94 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 LIPNQ5VXI9 398 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 ZNF425Q6IV72 752 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 TRILQ7L0X0 811 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 OR2T27Q8NH04 317 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 KISS1RQ969F8 398 aaPredicted RBP14.05□□□□□ -0.16
USP43-202ENST00000570475 TMEM106AQ96A25 262 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 ATG5Q9H1Y0 275 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 DCDC2BA2VCK2 349 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 SPARCP09486 303 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 GUCA2AQ02747 115 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 GRM7Q14831 915 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 NKPD1Q17RQ9 610 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 TMEM255AQ5JRV8 349 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 ULK3Q6PHR2 472 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 C3P1Q6ZMU1 363 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 JAGN1Q8N5M9 183 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 CHST4Q8NCG5 386 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 LSM14AQ8ND56 463 aaKnown RBP14.05□□□□□ -0.16
USP43-202ENST00000570475 RCBTB1Q8NDN9 531 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 FGF14Q92915 247 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 SCMH1Q96GD3 660 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 SOSTQ9BQB4 213 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 COMMD4Q9H0A8 199 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 MCCC2Q9HCC0 563 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 FBXL2Q9UKC9 423 aa14.05□□□□□ -0.16
USP43-202ENST00000570475 CLDN4O14493 209 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 XKRYO14609 159 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 SPI1P17947 270 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 NTSR1P30989 418 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 RPL22L1Q6P5R6 122 aaKnown RBP14.04□□□□□ -0.16
USP43-202ENST00000570475 USP53Q70EK8 1073 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 OR51Q1Q8NH59 317 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 RSC1A1Q92681 617 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 ZNF649Q9BS31 505 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 PFDN2Q9UHV9 154 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 MRPS33Q9Y291 106 aaKnown RBP14.04□□□□□ -0.16
USP43-202ENST00000570475 DTX4Q9Y2E6 619 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 FAM186AA6NE01 2351 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 C2orf74A8MZ97 194 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 SIGLEC5O15389 551 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 HCRTR1O43613 425 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 HCRTR2O43614 444 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 PTBP1P26599 531 aaKnown RBP eCLIP14.04□□□□□ -0.16
USP43-202ENST00000570475 BTCP35070 178 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 FBXW4P57775 412 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 SIGLEC14Q08ET2 396 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 DMKNQ6E0U4 476 aaPredicted RBP14.04□□□□□ -0.16
USP43-202ENST00000570475 Q6ZSR6 202 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 COMMD2Q86X83 199 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 FGF11Q92914 225 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 PGLYRP3Q96LB9 341 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 PRTFDC1Q9NRG1 225 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 C14orf105Q9NVL8 296 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 ZNF281Q9Y2X9 895 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 IFITM5A6NNB3 132 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 PLATP00750 562 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 HLA-DQB1P01920 261 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 THBS1P07996 1170 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 TACSTD2P09758 323 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 FAM157BP0CG42 384 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 POU3F2P20265 443 aaPredicted RBP14.04□□□□□ -0.16
USP43-202ENST00000570475 POU4F2Q12837 409 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 COL28A1Q2UY09 1125 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 ALG10Q5BKT4 473 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 UBE2NLQ5JXB2 153 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 KDM8Q8N371 416 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 ACTR6Q9GZN1 396 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 SYT4Q9H2B2 425 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 INPP5EQ9NRR6 644 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 DUSP22Q9NRW4 184 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 CENPMQ9NSP4 180 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 CPNE7Q9UBL6 633 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 SLC17A4Q9Y2C5 497 aa14.04□□□□□ -0.16
USP43-202ENST00000570475 TPOP07202 933 aa14.03□□□□□ -0.16
USP43-202ENST00000570475 CELA2BP08218 269 aaPredicted RBP14.03□□□□□ -0.16
USP43-202ENST00000570475 ARL4DP49703 201 aa14.03□□□□□ -0.16
USP43-202ENST00000570475 METTL11BQ5VVY1 283 aa14.03□□□□□ -0.16
USP43-202ENST00000570475 LIN54Q6MZP7 749 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms