RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 HKDC1Q2TB90 917 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 LINC01620Q4KN68 170 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 BCL7AQ4VC05 210 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 FGD3Q5JSP0 725 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 CCDC122Q5T0U0 273 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 TMEM225Q6GV28 225 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 OR4C11Q6IEV9 310 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 DPY19L2P2Q6ZN68 376 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 APTXQ7Z2E3 356 aaKnown RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF571Q7Z3V5 609 aaPredicted RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 FJX1Q86VR8 437 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF547Q8IVP9 402 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 VSTM4Q8IW00 320 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 SLC34A3Q8N130 599 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 DNAJC22Q8N4W6 341 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 ARFGAP2Q8N6H7 521 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 ADAD2Q8NCV1 583 aaKnown RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 GPR26Q8NDV2 337 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 NFAM1Q8NET5 270 aaPredicted RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 OR9K2Q8NGE7 335 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 OR13C3Q8NGS6 347 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 RAB3IL1Q8TBN0 382 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 DTX3LQ8TDB6 740 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 PEX13Q92968 403 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 FAF2Q96CS3 445 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF501Q96CX3 271 aaPredicted RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 CXorf40BQ96DE9 158 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 SLC47A1Q96FL8 570 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 COQ2Q96H96 371 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 NSL1Q96IY1 281 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF514Q96K75 400 aaPredicted RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 C20orf173Q96LM9 149 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF385AQ96PM9 386 aaKnown RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 NEDD4LQ96PU5 975 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 TRIB3Q96RU7 358 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 NPAS2Q99743 824 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 SPATA16Q9BXB7 569 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 KRTAP4-9Q9BYQ8 210 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 NLNQ9BYT8 704 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 ING2Q9H160 280 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 KAT8Q9H7Z6 458 aaKnown RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 ELOVL3Q9HB03 270 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 RPRD1BQ9NQG5 326 aaKnown RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 RBM22Q9NW64 420 aaKnown RBP eCLIP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 HIF1ANQ9NWT6 349 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 FLRT3Q9NZU0 649 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 SPATA7Q9P0W8 599 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 C19orf25Q9UFG5 118 aaPredicted RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 SLC23A2Q9UGH3 650 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF346Q9UL40 294 aaKnown RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 FARSAQ9Y285 508 aaKnown RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 F8P00451 2351 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 CNTRLQ7Z7A1 2325 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 CRYBG3Q68DQ2 2970 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 APCP25054 2843 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 SPTBP11277 2137 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 MTORP42345 2549 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 OTOGQ6ZRI0 2925 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 PPIAL4CA0A0B4J2A2 164 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 IGHV5-51A0A0C4DH38 117 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 SH3PXD2BA1X283 911 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 METTL21EPA6NDL7 271 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF487B1APH4 448 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 ZSCAN12O43309 604 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 CTSVO60911 334 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 GLRA3O75311 464 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 SAP30O75446 220 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 SCRG1O75711 98 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 CDK2AP2O75956 126 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 CDK14O94921 469 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 ZBTB11O95625 1053 aaPredicted RBP2.78□□□□□ -1.96
CNOT1-221ENST00000569924 CLDN1O95832 211 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 HLA-DQB2P05538 268 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 KLK3P07288 261 aaPredicted RBP2.78□□□□□ -1.96
CNOT1-221ENST00000569924 HBQ1P09105 142 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 CD48P09326 243 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 PPIAL4GP0DN37 164 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 PNMTP11086 282 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 DBTP11182 482 aaKnown RBP2.78□□□□□ -1.96
CNOT1-221ENST00000569924 CDH1P12830 882 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 PRF1P14222 555 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 UQCRBP14927 111 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 CPN1P15169 458 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 RORAP35398 523 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 CAPGP40121 348 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 PPP1CAP62136 330 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 PPIDQ08752 370 aaKnown RBP2.78□□□□□ -1.96
CNOT1-221ENST00000569924 FGL1Q08830 312 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 DLG1Q12959 904 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 DPYSL3Q14195 570 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 PDK2Q15119 407 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 EXT1Q16394 746 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 HADHQ16836 314 aaKnown RBP2.78□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF260Q3ZCT1 412 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 PRR30Q53SZ7 412 aaPredicted RBP2.78□□□□□ -1.96
CNOT1-221ENST00000569924 XKR6Q5GH73 641 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 PRAMEF5Q5TYX0 476 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 LCN1P1Q5VSP4 162 aa2.78□□□□□ -1.96
CNOT1-221ENST00000569924 C1orf189Q5VU69 101 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms