RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 GMNCA6NCL1 334 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 ZNF587BE7ETH6 402 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 SNX3O60493 162 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 TMCC2O75069 709 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 ITGA5P08648 1049 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 IL1RL1Q01638 556 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 NPTX1Q15818 432 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 GABRA6Q16445 453 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 LRRC23Q53EV4 343 aaPredicted RBP17.48■□□□□ 0.39
CMTM3-211ENST00000565922 NIPAL3Q6P499 406 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 TTC33Q6PID6 262 aaPredicted RBP17.48■□□□□ 0.39
CMTM3-211ENST00000565922 KLHL17Q6TDP4 642 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 HACD2Q6Y1H2 254 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 LSRQ86X29 649 aaPredicted RBP17.48■□□□□ 0.39
CMTM3-211ENST00000565922 EPHX4Q8IUS5 362 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 C10orf53Q8N6V4 93 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 LZICQ8WZA0 190 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 SLC19A3Q9BZV2 496 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 AMDHD2Q9Y303 409 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 SH3GLB1Q9Y371 365 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 MAGED1Q9Y5V3 778 aaPredicted RBP17.48■□□□□ 0.39
CMTM3-211ENST00000565922 AKAP9Q99996 3911 aa17.48■□□□□ 0.39
CMTM3-211ENST00000565922 F8P00451 2351 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 HS3ST1O14792 307 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 PAX7P23759 505 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 PRDX6P30041 224 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 KDELR2P33947 212 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 NUDT2P50583 147 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 CRYBA2P53672 197 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 ADAM5Q6NVV9 412 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 KLHL24Q6TFL4 600 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 LINC00114Q6XXX2 140 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 CARM1Q86X55 608 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 P3H2Q8IVL5 708 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 UEVLDQ8IX04 471 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 ZNF611Q8N823 705 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 SLC41A3Q96GZ6 507 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 LINC00470Q9BZP3 86 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 MRPL39Q9NYK5 338 aaKnown RBP17.47■□□□□ 0.39
CMTM3-211ENST00000565922 MGAT4BQ9UQ53 548 aa17.47■□□□□ 0.39
CMTM3-211ENST00000565922 CLOCKO15516 846 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 SMPD2O60906 423 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 SLC43A1O75387 559 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 BGLAPP02818 100 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 CBLP22681 906 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 IFNA8P32881 189 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 SELENOPP49908 381 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 SH3BGRP55822 239 aaPredicted RBP17.46■□□□□ 0.39
CMTM3-211ENST00000565922 CLDN17P56750 224 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 TAS2R41P59536 307 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 GNGT1P63211 74 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 BSPH1Q075Z2 132 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 PMS2P3Q13401 168 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 CYBRD1Q53TN4 286 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 SEZ6L2Q6UXD5 910 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 TMEM108Q6UXF1 575 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 TREML1Q86YW5 311 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 RBM45Q8IUH3 476 aaKnown RBP17.46■□□□□ 0.39
CMTM3-211ENST00000565922 SLC15A3Q8IY34 581 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 LRRC75A-AS1Q8N1F1 130 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 KDM8Q8N371 416 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 OR4D11Q8NGI4 311 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 OR52N5Q8NH56 324 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 AKAP1Q92667 903 aaKnown RBP eCLIP17.46■□□□□ 0.392e-6■■■□□ 17.2
CMTM3-211ENST00000565922 RADILQ96JH8 1075 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 MYLK2Q9H1R3 596 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 OBP2BQ9NPH6 170 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 CMTM6Q9NX76 183 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 B3GAT1Q9P2W7 334 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 SEC14L4Q9UDX3 406 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 SLC7A7Q9UM01 511 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 SLC25A15Q9Y619 301 aa17.46■□□□□ 0.39
CMTM3-211ENST00000565922 ROS1P08922 2347 aa17.46■□□□□ 0.38
CMTM3-211ENST00000565922 DYNC1I1O14576 645 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 WNT11O96014 354 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 DRD4P21917 467 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 PTAFRP25105 342 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 SLC7A2P52569 658 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 LIPEQ05469 1076 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 PUDPQ08623 228 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 C9orf135Q5VTT2 229 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 HMBOX1Q6NT76 420 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 DEF8Q6ZN54 512 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 PIK3C3Q8NEB9 887 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 ANKK1Q8NFD2 765 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 TMEM171Q8WVE6 324 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 FBXW5Q969U6 566 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 BOD1Q96IK1 185 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 ALKBH3Q96Q83 286 aaPredicted RBP17.45■□□□□ 0.38
CMTM3-211ENST00000565922 ALG2Q9H553 416 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 FKRPQ9H9S5 495 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 SLC17A5Q9NRA2 495 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 USP22Q9UPT9 525 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 NOX1Q9Y5S8 564 aa17.45■□□□□ 0.38
CMTM3-211ENST00000565922 CADP27708 2225 aa17.44■□□□□ 0.38
CMTM3-211ENST00000565922 ARID1AO14497 2285 aa17.44■□□□□ 0.38
CMTM3-211ENST00000565922 GSTA4O15217 222 aa17.44■□□□□ 0.38
CMTM3-211ENST00000565922 ARHGEF9O43307 516 aa17.44■□□□□ 0.38
CMTM3-211ENST00000565922 OR5F1O95221 314 aa17.44■□□□□ 0.38
CMTM3-211ENST00000565922 OR6A2O95222 327 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms