RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 PIKFYVEQ9Y2I7 2098 aa2.53□□□□□ -2
UBR1-205ENST00000564540 A0A1B0GUS0 222 aa2.53□□□□□ -2
UBR1-205ENST00000564540 CLDN5O00501 218 aa2.53□□□□□ -2
UBR1-205ENST00000564540 SNNO75324 88 aaPredicted RBP2.53□□□□□ -2
UBR1-205ENST00000564540 ERLIN1O75477 346 aa2.53□□□□□ -2
UBR1-205ENST00000564540 IL1BP01584 269 aa2.53□□□□□ -2
UBR1-205ENST00000564540 UQCRC2P22695 453 aa2.53□□□□□ -2
UBR1-205ENST00000564540 HTR2AP28223 471 aa2.53□□□□□ -2
UBR1-205ENST00000564540 PTGDSP41222 190 aa2.53□□□□□ -2
UBR1-205ENST00000564540 VDAC2P45880 294 aaPredicted RBP2.53□□□□□ -2
UBR1-205ENST00000564540 ACADVLP49748 655 aa2.53□□□□□ -2
UBR1-205ENST00000564540 DLX1P56177 255 aa2.53□□□□□ -2
UBR1-205ENST00000564540 MXD4Q14582 209 aaPredicted RBP2.53□□□□□ -2
UBR1-205ENST00000564540 FILIP1LQ4L180 1135 aa2.53□□□□□ -2
UBR1-205ENST00000564540 LRRC8BQ6P9F7 803 aa2.53□□□□□ -2
UBR1-205ENST00000564540 ZNF571Q7Z3V5 609 aaPredicted RBP2.53□□□□□ -2
UBR1-205ENST00000564540 SLC22A9Q8IVM8 553 aa2.53□□□□□ -2
UBR1-205ENST00000564540 FTMTQ8N4E7 242 aa2.53□□□□□ -2
UBR1-205ENST00000564540 ATP6V0D2Q8N8Y2 350 aa2.53□□□□□ -2
UBR1-205ENST00000564540 FBXO32Q969P5 355 aa2.53□□□□□ -2
UBR1-205ENST00000564540 FCRL1Q96LA6 429 aa2.53□□□□□ -2
UBR1-205ENST00000564540 P2RY13Q9BPV8 354 aa2.53□□□□□ -2
UBR1-205ENST00000564540 CCDC77Q9BR77 488 aa2.53□□□□□ -2
UBR1-205ENST00000564540 SLC35A5Q9BS91 424 aa2.53□□□□□ -2
UBR1-205ENST00000564540 CAPS2Q9BXY5 557 aa2.53□□□□□ -2
UBR1-205ENST00000564540 GPR61Q9BZJ8 451 aa2.53□□□□□ -2
UBR1-205ENST00000564540 NXF5Q9H1B4 397 aaKnown RBP2.53□□□□□ -2
UBR1-205ENST00000564540 NCOR1P1Q9H4R4 102 aa2.53□□□□□ -2
UBR1-205ENST00000564540 CCL28Q9NRJ3 127 aa2.53□□□□□ -2
UBR1-205ENST00000564540 DDX18Q9NVP1 670 aaKnown RBP2.53□□□□□ -2
UBR1-205ENST00000564540 CLEC4AQ9UMR7 237 aa2.53□□□□□ -2
UBR1-205ENST00000564540 CHMP2BQ9UQN3 213 aa2.53□□□□□ -2
UBR1-205ENST00000564540 MRPS33Q9Y291 106 aaKnown RBP2.53□□□□□ -2
UBR1-205ENST00000564540 SH3TC1Q8TE82 1336 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 GSAPA4D1B5 854 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 A8MUI8 341 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 IDSB3KWA1 339 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 DCTN6O00399 190 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 TM7SF2O76062 418 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 IGKV1-17P01599 117 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 MRPL3P09001 348 aaKnown RBP2.52□□□□□ -2.01
UBR1-205ENST00000564540 POLR2EP19388 210 aaKnown RBP2.52□□□□□ -2.01
UBR1-205ENST00000564540 PSMA2P25787 234 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 ANXA13P27216 316 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 CCR1P32246 355 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 HPCAL1P37235 193 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 RGS4P49798 205 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 DAP3P51398 398 aaKnown RBP2.52□□□□□ -2.01
UBR1-205ENST00000564540 AIF1P55008 147 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 RPS14P62263 151 aaKnown RBP2.52□□□□□ -2.01
UBR1-205ENST00000564540 IDI1Q13907 227 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 RSPO1Q2MKA7 263 aaPredicted RBP2.52□□□□□ -2.01
UBR1-205ENST00000564540 ZSCAN25Q6NSZ9 544 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 TAS2R42Q7RTR8 314 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 TTC5Q8N0Z6 440 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 AKR7LQ8NHP1 331 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 FGF11Q92914 225 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 NT5C3BQ969T7 300 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 SLC41A3Q96GZ6 507 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 ROGDIQ9GZN7 287 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 SUDS3Q9H7L9 328 aaPredicted RBP2.52□□□□□ -2.01
UBR1-205ENST00000564540 GLRX2Q9NS18 164 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 SIGLEC8Q9NYZ4 499 aa2.52□□□□□ -2.01
UBR1-205ENST00000564540 CAB39Q9Y376 341 aaPredicted RBP2.52□□□□□ -2.01
UBR1-205ENST00000564540 MBLAC1A4D2B0 266 aaPredicted RBP2.51□□□□□ -2.01
UBR1-205ENST00000564540 ZNF716A6NP11 495 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 CASQ2O14958 399 aaPredicted RBP2.51□□□□□ -2.01
UBR1-205ENST00000564540 AGPAT2O15120 278 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 RS1O15537 224 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 B4GALT2O60909 372 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 NEBLO76041 1014 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 STAMBPO95630 424 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 SERPINA3P01011 423 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 ZNF735P0CB33 412 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 HNF1AP20823 631 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 KIR2DS4P43632 304 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 PLA2G16P53816 162 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 ACTR3P61158 418 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 ACTA2P62736 377 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 ACTC1P68032 377 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 NUCB2P80303 420 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 CBX1P83916 185 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 SELPLGQ14242 412 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 TPD52L1Q16890 204 aaPredicted RBP2.51□□□□□ -2.01
UBR1-205ENST00000564540 BCL7AQ4VC05 210 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 TIGD3Q6B0B8 471 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 FRMPD2BQ6IN97 320 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 PYHIN1Q6K0P9 492 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 GDPD3Q7L5L3 318 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 CAMK2N1Q7Z7J9 78 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 PAQR7Q86WK9 346 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 ZNF615Q8N8J6 731 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 ZNF709Q8N972 641 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 BHLHE23Q8NDY6 225 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 AGR3Q8TD06 166 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 RLN3Q8WXF3 142 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 MRPS31Q92665 395 aaKnown RBP2.51□□□□□ -2.01
UBR1-205ENST00000564540 SENP8Q96LD8 212 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 ZNF670Q9BS34 389 aa2.51□□□□□ -2.01
UBR1-205ENST00000564540 ING2Q9H160 280 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms