RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 NR0B2Q15466 257 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 GSG1Q2KHT4 349 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF321PQ8N8H1 164 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF566Q969W8 418 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 NOL4LQ96MY1 436 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 METTL9Q9H1A3 318 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CWH43Q9H720 699 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TAC3Q9UHF0 121 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 PPP5D1E7EU14 171 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 GYPBP06028 91 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 HMGA2P52926 109 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 OR5I1Q13606 314 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MOB1AQ9H8S9 216 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ZMYM4Q5VZL5 1548 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ZDBF2Q9HCK1 2354 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 GPR39O43194 453 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MSCO60682 206 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 RPL29P47914 159 aaKnown RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 POLR2HP52434 150 aaKnown RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 COL5A1-AS1Q5SY13 56 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MRM1Q6IN84 353 aaKnown RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 C15orf39Q6ZRI6 1047 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 OR1S2Q8NGQ3 325 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 OR4F5Q8NH21 305 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 RTP4Q96DX8 246 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 OR4F4Q96R69 305 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 PDLIM7Q9NR12 457 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM189-UBE2V1I3L0A0 370 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 AK4P27144 223 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TECRLQ5HYJ1 363 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 UPRTQ96BW1 309 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SENP5Q96HI0 755 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 NMNAT3Q96T66 252 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SYT17Q9BSW7 474 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 OARD1Q9Y530 152 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SNU13P55769 128 aaKnown RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM123Q8N131 208 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF687Q8N1G0 1237 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 PRSS35Q8N3Z0 413 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CDCA5Q96FF9 252 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 GDF2Q9UK05 429 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 FAM183AA6NL82 134 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 VSTM5A8MXK1 200 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MAN2B1O00754 1011 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 P2RX6O15547 441 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 BDKRB1P46663 353 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 FAM199XQ6PEV8 388 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CLEC20AQ6ZU45 233 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SULF2Q8IWU5 870 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SLC35G5Q96KT7 338 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MARVELD1Q9BSK0 173 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 EDEM2Q9BV94 578 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TREX1Q9NSU2 369 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 NME2P1O60361 137 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SLC25A35Q3KQZ1 300 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MTMR14Q8NCE2 650 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ANKRD9Q96BM1 317 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 POPDC3Q9HBV1 291 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 DNMBPQ6XZF7 1577 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 M0R3H8 397 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MT-CO2P00403 227 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 AADACP22760 399 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CORO1AP31146 461 aaKnown RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 RIDAP52758 137 aaKnown RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TANKQ92844 425 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TLNRD1Q9H1K6 362 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ERVH48-1M5A8F1 160 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 FRS3O43559 492 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TSPAN6O43657 245 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 LRRC73Q5JTD7 316 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 OR2A2Q6IF42 318 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 PHYHIPLQ96FC7 376 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 BSCL2Q96G97 398 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TRIB1Q96RU8 372 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 HIPK2Q9H2X6 1198 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF160Q9HCG1 818 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SUSD2Q9UGT4 822 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 NENFQ9UMX5 172 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 POMT1Q9Y6A1 747 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MEIKINA0A087WXM9 373 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 A8MVM7 634 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CHRM2P08172 466 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TACR1P25103 407 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 GDF7Q7Z4P5 450 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 VRK2Q86Y07 508 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MDGA1Q8NFP4 955 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 RNF150Q9ULK6 438 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CNTNAP1P78357 1384 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 WNT1P04628 370 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CXCL3P19876 107 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SLC14A2Q15849 920 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 HSD17B13Q7Z5P4 300 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CNTN4Q8IWV2 1026 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 RCBTB1Q8NDN9 531 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 OR52R1Q8NGF1 315 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 KCNG2Q9UJ96 466 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 HLA-DRB3P79483 266 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SMAD2Q15796 467 aaKnown RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM65Q6PI78 240 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MAMSTRQ6ZN01 415 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms