RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 PSMD4P55036 377 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 SNRPD1P62314 119 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 MERTKQ12866 999 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 SCGB2A2Q13296 93 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM187Q14656 261 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 SLC17A1Q14916 467 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 C18orf21Q32NC0 220 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 HES5Q5TA89 166 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 UNQ9370/PRO34162Q6UXP9 181 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RBM43Q6ZSC3 357 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 P4HA3Q7Z4N8 544 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PTAR1Q7Z6K3 402 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CROCCP3Q8IVE0 287 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF440Q8IYI8 595 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM185AQ8NFB2 350 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RDH11Q8TC12 318 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PYROXD1Q8WU10 500 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RASSF5Q8WWW0 418 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PHYHIPQ92561 330 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 DLX4Q92988 240 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 DCPSQ96C86 337 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 TSSK3Q96PN8 268 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 NEDD4LQ96PU5 975 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ACCSQ96QU6 501 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 C12orf57Q99622 126 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 SELENOSQ9BQE4 189 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF717Q9BY31 904 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 SPNS1Q9H2V7 528 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 MOB1AQ9H8S9 216 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 FN3KRPQ9HA64 309 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 AMBNQ9NP70 447 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PURGQ9UJV8 347 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RHBDD3Q9Y3P4 386 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 SNAPC4Q5SXM2 1469 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 BCL9LQ86UU0 1499 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CD109Q6YHK3 1445 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CFAP43Q8NDM7 1665 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ABCC10Q5T3U5 1492 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 A0A1B0GV90 55 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 NDUFAF8A1L188 74 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 OR5H15A6NDH6 313 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 TRABD2BA6NFA1 517 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RFPL4AA6NLU0 287 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF99A8MXY4 864 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 NEDD8-MDP1E9PL57 170 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RFPL4AL1F8VTS6 287 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 KLRC4-KLRK1H3BQV0 150 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 EMC8O43402 210 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 B4GALT2O60909 372 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PLEKP08567 350 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 MELTFP08582 738 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 KRT7P08729 469 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 FOLR1P15328 257 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 LAP3P28838 519 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 OTX1P32242 354 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RAB13P51153 203 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 NME5P56597 212 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 FKBP3Q00688 224 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CSTF1Q05048 431 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 TPBGQ13641 420 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 TFDP1Q14186 410 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RCAN2Q14206 197 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 WDR43Q15061 677 aaKnown RBP eCLIP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ACSBG2Q5FVE4 666 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 SLC35D2Q76EJ3 337 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF573Q86YE8 665 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 SERPINA12Q8IW75 414 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 LRRC8AQ8IWT6 810 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 BATF2Q8N1L9 274 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ARRDC1Q8N5I2 433 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 Q8NBF4 154 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ZNRF1Q8ND25 227 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 OR2L3Q8NG85 312 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 OR4M2Q8NGB6 313 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 OR4F5Q8NH21 305 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 OR4K15Q8NH41 348 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 OR4L1Q8NH43 312 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 C11orf45Q8TAV5 145 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ARNTL2Q8WYA1 636 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 UFD1Q92890 307 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PSMG2Q969U7 264 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 HAVCR1Q96D42 359 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 MAPKAP1Q9BPZ7 522 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RAB1BQ9H0U4 201 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CD209Q9NNX6 404 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 VCX3AQ9NNX9 186 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CCNB1IP1Q9NPC3 277 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 ZCCHC3Q9NUD5 404 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 MED17Q9NVC6 651 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RBAKQ9NYW8 714 aaPredicted RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 UVRAGQ9P2Y5 699 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 GALPQ9UBC7 116 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 NDRG2Q9UN36 371 aaKnown RBP1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PSG11Q9UQ72 335 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RNF6Q9Y252 685 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RIMBP3CA6NJZ7 1639 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 RIMBP3BA6NNM3 1639 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 PTPRFP10586 1907 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 CARMIL3Q8ND23 1372 aa1.38□□□□□ -2.19
HIF1A-212ENST00000557538 NALCNQ8IZF0 1738 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms