RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 H0YIG0 161 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 SLC9A3R1O14745 358 aaPredicted RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 SHOX2O60902 331 aaPredicted RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 CXCL14O95715 111 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 AGTP01019 485 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 IFNB1P01574 187 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 C1QAP02745 245 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 HSPB1P04792 205 aaKnown RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 APRTP07741 180 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 CCNB1P14635 433 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 HOXB8P17481 243 aaPredicted RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 DNAJB1P25685 340 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 PHBP35232 272 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 ADRA1AP35348 466 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 MAGEA4P43358 317 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 CSNK1DP48730 415 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 NPY2RP49146 381 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 GEMP55040 296 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 DYNLT1P63172 113 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 BASP1P80723 227 aaKnown RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 ARF5P84085 180 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 CDKL1Q00532 357 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 GNA12Q03113 381 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 GABPB1Q06547 395 aaPredicted RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 CD47Q08722 323 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 PSG7Q13046 419 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 DNAJC3Q13217 504 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 SNX1Q13596 522 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 DMC1Q14565 340 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 P2RY14Q15391 338 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 WSCD2Q2TBF2 565 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 KLHL38Q2WGJ6 581 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 C2orf76Q3KRA6 126 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 AARDQ4LEZ3 155 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 PPM1LQ5SGD2 360 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 C1QTNF12Q5T7M4 302 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 SDHAF4Q5VUM1 108 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 PRAMEF8Q5VWM4 474 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 OTPQ5XKR4 325 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 KDM7AQ6ZMT4 941 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 NLRP9Q7RTR0 991 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 PRSS42Q7Z5A4 293 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 TMEM135Q86UB9 458 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 LCA5Q86VQ0 697 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 ZNF567Q8N184 647 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 BBS5Q8N3I7 341 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 ARFGAP2Q8N6H7 521 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 C14orf178Q8N769 122 aaPredicted RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 DCAF4L2Q8NA75 395 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 HAS2Q92819 552 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 PTP4A1Q93096 173 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 ISG20Q96AZ6 181 aaKnown RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 MRPL38Q96DV4 380 aaKnown RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 IMP4Q96G21 291 aaKnown RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 ATP6V1G3Q96LB4 118 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 PSKH2Q96QS6 385 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 S1PR3Q99500 378 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 ZNF184Q99676 751 aaPredicted RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 EBNA1BP2Q99848 306 aaKnown RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 SPAG8Q99932 426 aaPredicted RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 CCDC77Q9BR77 488 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 ACPTQ9BZG2 426 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 SLC25A51Q9H1U9 297 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 DPH5Q9H2P9 285 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 PRO3102Q9H379 93 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 LRRC40Q9H9A6 602 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 ADGRL4Q9HBW9 690 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 TMBIM4Q9HC24 238 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 GPATCH2LQ9NWQ4 482 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 NINJ2Q9NZG7 142 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 CIDEBQ9UHD4 219 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 XPO7Q9UIA9 1087 aaKnown RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 PSORS1C1Q9UIG5 152 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 LSM7Q9UK45 103 aaKnown RBP2.6□□□□□ -1.99
VRK1-207ENST00000557352 HEY1Q9Y5J3 304 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 SNX5Q9Y5X3 404 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 TRIOO75962 3097 aa2.6□□□□□ -1.99
VRK1-207ENST00000557352 CCDC88CQ9P219 2028 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 TNRC6BQ9UPQ9 1833 aaKnown RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 SEC16AO15027 2179 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 SYNJ2BP-COX16A0A087WUM0 186 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 A0A0A6YYC8 382 aaPredicted RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 LOC285095A0A1B0GVY8 99 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 A0A1W2PQ67 120 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 TCRBV9S1A1TA0A576 114 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 FAM159BA6NKW6 160 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 HIDE1A8MVS5 230 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 B4DXG7 233 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 H3BQF6 201 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 I3L1I5 382 aaPredicted RBP2.59□□□□□ -1.99
VRK1-207ENST00000557352 RASGRF2O14827 1237 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 KDELR3O43731 214 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 ATP6V1G1O75348 118 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 ZMPSTE24O75844 475 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 CPNE6O95741 557 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 FGF1P05230 155 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 HLA-DQB2P05538 268 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 CA3P07451 260 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 CHRNGP07510 517 aa2.59□□□□□ -1.99
VRK1-207ENST00000557352 SFTPBP07988 381 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms