RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PTNP21246 168 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 CXCR1P25024 350 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 SOX6P35712 828 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 ETV6P41212 452 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 TMED10P49755 219 aaKnown RBP7.52□□□□□ -1.21
ATXN3-235ENST00000556082 DIO1P49895 249 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 CCR4P51679 360 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 E2F1Q01094 437 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 LTBQ06643 244 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 GALEQ14376 348 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 PON3Q15166 354 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 EXT1Q16394 746 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 OR2G6Q5TZ20 316 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 LCN1P1Q5VSP4 162 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 LIPKQ5VXJ0 399 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 FAAH2Q6GMR7 532 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 FAM122BQ7Z309 247 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 LHFPL3Q86UP9 236 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 GPALPP1Q8IXQ4 340 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 MFSD4AQ8N468 514 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 TMCO5AQ8N6Q1 288 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 SIRT6Q8N6T7 355 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 LRRC17Q8N6Y2 441 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 NPEPL1Q8NDH3 523 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 OR52E2Q8NGJ4 325 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 ELP5Q8TE02 316 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 GATAD2BQ8WXI9 593 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 IMMP1LQ96LU5 166 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 SNX18Q96RF0 628 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 TIMP4Q99727 224 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 CMKLR1Q99788 373 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 HCAR1Q9BXC0 346 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 ARRDC1-AS1Q9H2J1 176 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 ADGRL4Q9HBW9 690 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 SDHAF3Q9NRP4 125 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 GPN3Q9UHW5 284 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-235ENST00000556082 MOKQ9UQ07 419 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 PCDHGB7Q9Y5F8 929 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 IER3IP1Q9Y5U9 82 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 PEX16Q9Y5Y5 336 aa7.52□□□□□ -1.21
ATXN3-235ENST00000556082 SPIN1Q9Y657 262 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-235ENST00000556082 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 DAPL1A0PJW8 107 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 ANKUB1A6NFN9 424 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 C12orf71A8MTZ7 269 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 C9J4A7 227 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 MCIDASD6RGH6 385 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 SLC30A4O14863 429 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 PLD2O14939 933 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 OR2T1O43869 369 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 FZD7O75084 574 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 KLF7O75840 302 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-235ENST00000556082 BGLAPP02818 100 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 MT-ND5P03915 603 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 HLA-DPB1P04440 258 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 HIST1H2ABP04908 130 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 CD1AP06126 327 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 OR2T7P0C7T2 308 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 CCL4P13236 92 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 ZNF28P17035 718 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 ITPKBP27987 946 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 CD40LGP29965 261 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 IDUAP35475 653 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 RPL4P36578 427 aaKnown RBP7.51□□□□□ -1.21
ATXN3-235ENST00000556082 APOBEC1P41238 236 aaKnown RBP7.51□□□□□ -1.21
ATXN3-235ENST00000556082 TAS2R43P59537 309 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 HSF2Q03933 536 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 SNTA1Q13424 505 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 PCOLCEQ15113 449 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 QPRTQ15274 297 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 TRAM1Q15629 374 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 KLHL12Q53G59 568 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 SOWAHCQ53LP3 525 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-235ENST00000556082 ALG10Q5BKT4 473 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 SLC25A53Q5H9E4 307 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 TMEM81Q6P7N7 255 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 FAM198BQ6UWH4 519 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 HIST3H2AQ7L7L0 130 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 MAMDC2Q7Z304 686 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-235ENST00000556082 ADGRG3Q86Y34 549 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 DND1Q8IYX4 353 aaKnown RBP7.51□□□□□ -1.21
ATXN3-235ENST00000556082 SYS1Q8N2H4 156 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 ARIH2OSQ8N7S6 290 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 EXD3Q8N9H8 876 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 FAM98AQ8NCA5 519 aaKnown RBP7.51□□□□□ -1.21
ATXN3-235ENST00000556082 OR51G2Q8NGK0 314 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 OR2Y1Q8NGV0 311 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 OR2T27Q8NH04 317 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 OR4K13Q8NH42 304 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 MOSPD2Q8NHP6 518 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 M1APQ8TC57 530 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 FNDC8Q8TC99 324 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 SLC22A8Q8TCC7 542 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 DUSP19Q8WTR2 217 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 HIST1H2ACQ93077 130 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 TAAR8Q969N4 342 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 NACC2Q96BF6 587 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 KTI12Q96EK9 354 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-235ENST00000556082 MOGAT1Q96PD6 335 aa7.51□□□□□ -1.21
ATXN3-235ENST00000556082 ALG8Q9BVK2 526 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms