RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ATXN10Q9UBB4 475 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 PCYOX1Q9UHG3 505 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 HOOK1Q9UJC3 728 aaKnown RBP0.94□□□□□ -2.26
SRP54-207ENST00000555535 STAP1Q9ULZ2 295 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 RNF6Q9Y252 685 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 SPACA6W5XKT8 324 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 TSPOAP1O95153 1857 aa0.94□□□□□ -2.26
SRP54-207ENST00000555535 NSG1A0A0A6YYJ2 146 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 IGHV2-70DA0A0C4DH43 119 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 A0A1W2PP18 115 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 E7ESA3 106 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 RGS16O15492 202 aaPredicted RBP0.93□□□□□ -2.26
SRP54-207ENST00000555535 OR1F1O43749 312 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 SEC22BO75396 215 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 UGT2B17O75795 530 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 NEBLO76041 1014 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 LGALS3P17931 250 aaKnown RBP0.93□□□□□ -2.26
SRP54-207ENST00000555535 TNNI3P19429 210 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 FGF9P31371 208 aaPredicted RBP0.93□□□□□ -2.26
SRP54-207ENST00000555535 SHMT2P34897 504 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 HMGCS1Q01581 520 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 SMARCB1Q12824 385 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 GUCA2BQ16661 112 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 LINC01620Q4KN68 170 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 PARP10Q53GL7 1025 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 TIGD3Q6B0B8 471 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 LCN12Q6JVE5 192 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 NIPAL3Q6P499 406 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 FAM92BQ6ZTR7 304 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 LINC00336Q6ZUF6 198 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 OR4K14Q8NGD5 310 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 NANPQ8TBE9 248 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 TCTEX1D2Q8WW35 142 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 MYLPFQ96A32 169 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 CMTM7Q96FZ5 175 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 C4orf36Q96KX1 117 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 POLR1EQ9GZS1 481 aaKnown RBP0.93□□□□□ -2.26
SRP54-207ENST00000555535 RHBGQ9H310 441 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 SUDS3Q9H7L9 328 aaPredicted RBP0.93□□□□□ -2.26
SRP54-207ENST00000555535 ECT2Q9H8V3 914 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 MEAF6Q9HAF1 191 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 SIAEQ9HAT2 523 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 SLC17A5Q9NRA2 495 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 GNG12Q9UBI6 72 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 CHRNA9Q9UGM1 479 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 ODF2LQ9ULJ1 636 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 PIN4Q9Y237 131 aaKnown RBP0.93□□□□□ -2.26
SRP54-207ENST00000555535 SLC25A15Q9Y619 301 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 CARMIL1Q5VZK9 1371 aa0.93□□□□□ -2.26
SRP54-207ENST00000555535 ATP8B3O60423 1300 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 SH3TC1Q8TE82 1336 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 ARPC4-TTLL3A0A0A6YYG9 625 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 DCTN6O00399 190 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 PEX7O00628 323 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 CHADO15335 359 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 RS1O15537 224 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 RBFOX2O43251 390 aaKnown RBP eCLIP0.92□□□□□ -2.26
SRP54-207ENST00000555535 CDRT1O95170 752 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 STAMBPO95630 424 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 DIRAS3O95661 229 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 CALCBP10092 127 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 NCF1P14598 390 aaPredicted RBP0.92□□□□□ -2.26
SRP54-207ENST00000555535 ARF4P18085 180 aaPredicted RBP0.92□□□□□ -2.26
SRP54-207ENST00000555535 ATP6V1C1P21283 382 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 PCMT1P22061 227 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 DNAJB1P25685 340 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 PTGDSP41222 190 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 GLP1RP43220 463 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 PSMD8P48556 350 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 DAP3P51398 398 aaKnown RBP0.92□□□□□ -2.26
SRP54-207ENST00000555535 GPM6AP51674 278 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 PLA2G16P53816 162 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 PKNOX1P55347 436 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 RPS14P62263 151 aaKnown RBP0.92□□□□□ -2.26
SRP54-207ENST00000555535 IL1RL1Q01638 556 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 SYCNQ0VAF6 134 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 PDIA2Q13087 525 aaKnown RBP0.92□□□□□ -2.26
SRP54-207ENST00000555535 PLD1Q13393 1074 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 ATP6AP1Q15904 470 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 SLC15A2Q16348 729 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 DMRTC1Q5HYR2 192 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 TPGS2Q68CL5 300 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 CBLN3Q6UW01 205 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 WDR86Q86TI4 376 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 GRAMD2AQ8IUY3 354 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 CLEC4FQ8N1N0 589 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 OR5AU1Q8NGC0 362 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 CTNNBL1Q8WYA6 563 aaPredicted RBP0.92□□□□□ -2.26
SRP54-207ENST00000555535 DNAJC19Q96DA6 116 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 TMEM246Q9BRR3 403 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 FICDQ9BVA6 458 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 TMEM117Q9H0C3 514 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 C1orf21Q9H246 121 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 DPH5Q9H2P9 285 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 FOLH1BQ9HBA9 442 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 SLCO1B3Q9NPD5 702 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 B9D1Q9UPM9 204 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 GSTK1Q9Y2Q3 226 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 S4R3C0 116 aa0.92□□□□□ -2.26
SRP54-207ENST00000555535 GPATCH8Q9UKJ3 1502 aaKnown RBP0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms