RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 MPDZO75970 2070 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 A0A1W2PNV4 684 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 EFCAB9A8MZ26 197 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 CDC42EP2O14613 210 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 GPR171O14626 319 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 OR10H3O60404 316 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 TNFSF13O75888 250 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 CCNB2O95067 398 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 GASTP01350 101 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 HIST1H2ABP04908 130 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 YES1P07947 543 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 CBLP22681 906 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 GTF2E2P29084 291 aaKnown RBP11.29□□□□□ -0.6
SYNE2-219ENST00000555323 KIR2DL2P43627 348 aaPredicted RBP11.29□□□□□ -0.6
SYNE2-219ENST00000555323 GSSP48637 474 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 ARHGDIAP52565 204 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 IST1P53990 364 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 RPS4XP62701 263 aaKnown RBP11.29□□□□□ -0.6
SYNE2-219ENST00000555323 FOXF2Q12947 444 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 PPP1R8Q12972 351 aaKnown RBP11.29□□□□□ -0.6
SYNE2-219ENST00000555323 PMS2P3Q13401 168 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 HMBOX1Q6NT76 420 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 PGBD2Q6P3X8 592 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 SHQ1Q6PI26 577 aaKnown RBP11.29□□□□□ -0.6
SYNE2-219ENST00000555323 FAM214BQ7L5A3 538 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 HIST3H2AQ7L7L0 130 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 PXKQ7Z7A4 578 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 ZIC4Q8N9L1 334 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 GNPDA2Q8TDQ7 276 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 LRTOMTQ8WZ04 291 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 HIST1H2ACQ93077 130 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 INTS12Q96CB8 462 aaKnown RBP11.29□□□□□ -0.6
SYNE2-219ENST00000555323 CENPNQ96H22 339 aaPredicted RBP11.29□□□□□ -0.6
SYNE2-219ENST00000555323 GPA33Q99795 319 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 KLHL13Q9P2N7 655 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 MYO7BQ6PIF6 2116 aa11.29□□□□□ -0.6
SYNE2-219ENST00000555323 KIAA1549Q9HCM3 1950 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 CGAP01215 116 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 TMIGD3P0DMS9 266 aaPredicted RBP11.28□□□□□ -0.6
SYNE2-219ENST00000555323 FPR3P25089 353 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 UQCRC1P31930 480 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 NTF4P34130 210 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 OPRM1P35372 400 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 PER3P56645 1201 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 ELF3P78545 371 aaPredicted RBP11.28□□□□□ -0.6
SYNE2-219ENST00000555323 SRSF1Q07955 248 aaKnown RBP eCLIP11.28□□□□□ -0.6
SYNE2-219ENST00000555323 PUDPQ08623 228 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 COX10Q12887 443 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 TSPAN31Q12999 210 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 ZBED5Q49AG3 693 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 CD300LDQ6UXZ3 194 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 NCCRP1Q6ZVX7 275 aaPredicted RBP11.28□□□□□ -0.6
SYNE2-219ENST00000555323 CREB3L2Q70SY1 520 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 OAFQ86UD1 273 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 EPHX4Q8IUS5 362 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 MCEMP1Q8IX19 187 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 TUSC5Q8IXB3 177 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 KDM8Q8N371 416 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 LRRC75AQ8NAA5 344 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 OR10G2Q8NGC3 310 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 OR9K2Q8NGE7 335 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 OR5K1Q8NHB7 308 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 GIPC3Q8TF64 312 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 FAM46AQ96IP4 442 aaKnown RBP11.28□□□□□ -0.6
SYNE2-219ENST00000555323 TNFRSF13CQ96RJ3 184 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 PKP2Q99959 881 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 SFXN3Q9BWM7 321 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 DGCR6LQ9BY27 220 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 PLSCR4Q9NRQ2 329 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 EMC3Q9P0I2 261 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 MGAT4BQ9UQ53 548 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 RNF6Q9Y252 685 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 SIGLEC7Q9Y286 467 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 FLVCR1Q9Y5Y0 555 aa11.28□□□□□ -0.6
SYNE2-219ENST00000555323 ARHGAP21Q5T5U3 1957 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 BLOC1S5-TXNDC5H3BN57 136 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 PYCARD-AS1I3L0S3 204 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 E2F6O75461 281 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 HPRP00739 348 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 PLGP00747 810 aaPredicted RBP11.27□□□□□ -0.61
SYNE2-219ENST00000555323 ADORA3P0DMS8 318 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 SAGP10523 405 aaPredicted RBP11.27□□□□□ -0.61
SYNE2-219ENST00000555323 ANXA8P13928 327 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF43P17038 809 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 AGTR1P30556 359 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 CHRNB4P30926 498 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 GPR4P46093 362 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 SMSP52788 366 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 PRPS1P60891 318 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 RPL18Q07020 188 aaKnown RBP11.27□□□□□ -0.61
SYNE2-219ENST00000555323 LAPTM4AQ15012 233 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 TMEM201Q5SNT2 666 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 PPP4R4Q6NUP7 873 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 XKRXQ6PP77 449 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 ZNF771Q7L3S4 317 aaPredicted RBP11.27□□□□□ -0.61
SYNE2-219ENST00000555323 NANOGNBQ7Z5D8 188 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 GALNT5Q7Z7M9 940 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 AMIGO2Q86SJ2 522 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 HIPK1Q86Z02 1210 aa11.27□□□□□ -0.61
SYNE2-219ENST00000555323 LIX1LQ8IVB5 337 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms