RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CCDC88CQ9P219 2028 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 HECTD1Q9ULT8 2610 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TRAV1-2A0A0B4J238 106 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 A0A0B4J293 547 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 C12orf71A8MTZ7 269 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 CDRT15L2A8MXV6 281 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 ISM1B1AKI9 464 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 BTN3A3O00478 584 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 HMGN4O00479 90 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 GABRPO00591 440 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 AP3D1O14617 1153 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 PLRG1O43660 514 aaKnown RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 SULT1B1O43704 296 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 GSTZ1O43708 216 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 CHP2O43745 196 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 KCNJ13O60928 360 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 GATBO75879 557 aaKnown RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 ARL6IP5O75915 188 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 UBL3O95164 117 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 MT-ND5P03915 603 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 RAF1P04049 648 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 AMY1AP04745 511 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 IFNA16P05015 189 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 TNNI3P19429 210 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 TNFRSF1BP20333 461 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 AHCYP23526 432 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 MMP11P24347 488 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 ATP6V1E1P36543 226 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 MAN2A2P49641 1150 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 MMP15P51511 669 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 GAS1P54826 345 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 PER3P56645 1201 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 TAS2R41P59536 307 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 RPS25P62851 125 aaKnown RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 REEP5Q00765 189 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 FABP5Q01469 135 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 MXD1Q05195 221 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 FOXE3Q13461 319 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 ELAVL3Q14576 367 aaKnown RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 PTPRRQ15256 657 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 GRK1Q15835 563 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 ZSWIM7Q19AV6 140 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 ISXQ2M1V0 245 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 MPEG1Q2M385 716 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF658BQ4V348 819 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 PLA1AQ53H76 456 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 AADACL4Q5VUY2 407 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 FAM46CQ5VWP2 391 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 TMEM220Q6QAJ8 160 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 TEX261Q6UWH6 196 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 DOK3Q7L591 496 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 Q8N1X5 172 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 CADM2Q8N3J6 435 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 SLC25A45Q8N413 288 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 ARL14Q8N4G2 192 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 ACBD7Q8N6N7 88 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 RASGEF1AQ8N9B8 481 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 SYT14Q8NB59 555 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 OR8H1Q8NGG4 311 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 OR52L1Q8NGH7 329 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 OR5H6Q8NGV6 325 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 OR2L2Q8NH16 312 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 OR56B4Q8NH76 319 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 LRRC20Q8TCA0 184 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 WFDC5Q8TCV5 224 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 BRIX1Q8TDN6 353 aaKnown RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF431Q8TF32 576 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 THRSPQ92748 146 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 CIDECQ96AQ7 238 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 TM4SF18Q96CE8 201 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 RNF31Q96EP0 1072 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 DTD2Q96FN9 168 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 CCNL2Q96S94 520 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 ARHGDIGQ99819 225 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 THAP7Q9BT49 309 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 RIOK2Q9BVS4 552 aaKnown RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 ABCG5Q9H222 651 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 SPNS1Q9H2V7 528 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 OSGEPL1Q9H4B0 414 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF703Q9H7S9 590 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 DDX31Q9H8H2 851 aaKnown RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 STARD5Q9NSY2 213 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 C14orf105Q9NVL8 296 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 BABAM2Q9NXR7 383 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 IL20Q9NYY1 176 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 GLTPQ9NZD2 209 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF624Q9P2J8 865 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 NLKQ9UBE8 527 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 COMMD3Q9UBI1 195 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 EXTL2Q9UBQ6 330 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 IL36AQ9UHA7 158 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 UBQLN2Q9UHD9 624 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 FBXW2Q9UKT8 454 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 MAB21L2Q9Y586 359 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 U3KQ87 197 aa5.42□□□□□ -1.54
VPS33B-203ENST00000554264 NUP214P35658 2090 aaPredicted RBP5.42□□□□□ -1.54
VPS33B-203ENST00000554264 MEIKINA0A087WXM9 373 aa5.41□□□□□ -1.54
VPS33B-203ENST00000554264 ZSCAN5BA6NJL1 495 aa5.41□□□□□ -1.54
VPS33B-203ENST00000554264 OR2AG2A6NM03 316 aa5.41□□□□□ -1.54
VPS33B-203ENST00000554264 LRRN3E7EW58 273 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms