RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 SOX21Q9Y651 276 aaPredicted RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 AP4B1Q9Y6B7 739 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 NUP214P35658 2090 aaPredicted RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 KMT2CQ8NEZ4 4911 aaKnown RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 HEATR1Q9H583 2144 aaKnown RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 A0A096LPK6 155 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF716A6NP11 495 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 NPIPB9F8W1W9 429 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 RAB27BO00194 218 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 MANBAO00462 879 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF195O14628 629 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 UGDHO60701 494 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 TMCC2O75069 709 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 RAD51DO75771 328 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 KCNK2O95069 426 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 NKX2-2O95096 273 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 GAS8-AS1O95177 125 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 KLHL2O95198 593 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 STAMBPO95630 424 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 SCGB1D2O95969 90 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 TGFAP01135 160 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 DDX5P17844 614 aaKnown RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 USF1P22415 310 aaPredicted RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 IL12BP29460 328 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 SERPINB1P30740 379 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 CALCRP30988 508 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 FRKP42685 505 aaPredicted RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 ASMTP46597 345 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 OR3A2P47893 321 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 RFX3P48380 749 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 COMPP49747 757 aaPredicted RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF83P51522 516 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 CCNG1P51959 295 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 NUDT6P53370 316 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 ALDH18A1P54886 795 aaKnown RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 ARL4CP56559 192 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 KRTAP10-3P60369 221 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 EEF1A1P68104 462 aaKnown RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 RPP38P78345 283 aaKnown RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 MRPS22P82650 360 aaKnown RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 BTKQ06187 659 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 C2orf54Q08AI8 447 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF155Q12901 538 aaPredicted RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 ITGADQ13349 1161 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 PIN1Q13526 163 aaPredicted RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 EFR3AQ14156 821 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 GALEQ14376 348 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 GGTLC2Q14390 218 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 SLC29A2Q14542 456 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 SLMAPQ14BN4 828 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 SF3B4Q15427 424 aaKnown RBP eCLIP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 STK11Q15831 433 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 GABRA6Q16445 453 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 TMEM176BQ3YBM2 270 aaPredicted RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 GLYR1Q49A26 553 aaPredicted RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 PDLIM3Q53GG5 364 aaPredicted RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 TMEM255AQ5JRV8 349 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 CPTPQ5TA50 214 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 GRTP1Q5TC63 336 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 EEF1A1P5Q5VTE0 462 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 C9orf135Q5VTT2 229 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 HBMQ6B0K9 141 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 CYS1Q717R9 158 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 HMGN2P46Q86SG4 172 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 CLEC4FQ8N1N0 589 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 MUC15Q8N387 334 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 ZDHHC22Q8N966 263 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 BANPQ8N9N5 519 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 ZBTB34Q8NCN2 500 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 ATP6V1C2Q8NEY4 427 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 OR2T11Q8NH01 316 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 GPR119Q8TDV5 335 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 SELENOMQ8WWX9 145 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 PROX1Q92786 737 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 UBE2E3Q969T4 207 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 C3orf49Q96BT1 292 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 NMD3Q96D46 503 aaKnown RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 ARL5BQ96KC2 179 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 LRGUKQ96M69 825 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 KLHL15Q96M94 604 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 C1orf147Q96MC9 270 aaPredicted RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 AMDHD1Q96NU7 426 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 TMEM237Q96Q45 408 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 DHRS9Q9BPW9 319 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 RHNO1Q9BSD3 238 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 NAT9Q9BTE0 207 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 GATA5Q9BWX5 397 aaPredicted RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 POTEKPQ9BYX7 375 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 SHARPINQ9H0F6 387 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 TUBB1Q9H4B7 451 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 SAP30LQ9HAJ7 183 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 NMRAL1Q9HBL8 299 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 SLC35C2Q9NQQ7 365 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 FAM120CQ9NX05 1096 aaKnown RBP2.71□□□□□ -1.98
SLIRP-202ENST00000553981 GIN1Q9NXP7 522 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 TMEM216Q9P0N5 145 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 GIMAP2Q9UG22 337 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 MID2Q9UJV3 735 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF180Q9UJW8 692 aa2.71□□□□□ -1.98
SLIRP-202ENST00000553981 EMCNQ9ULC0 261 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms