RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 MYH3P11055 1940 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 AK9Q5TCS8 1911 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 RAI1Q7Z5J4 1906 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 TRANK1O15050 2925 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 CFAP54Q96N23 3096 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 PLXNA1Q9UIW2 1896 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 TRBV7-9A0A0J9YWB2 115 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 FAM240BA0A1B0GVZ2 78 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 RNF222A6NCQ9 220 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 FBLL1A6NHQ2 334 aaKnown RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 FAM74A7A6NL05 159 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 TMEM110-MUSTN1A8MSY1 372 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 SDHDO14521 159 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 PPIHO43447 177 aaKnown RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 DUX1O43812 170 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 NOL4O94818 638 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 TIMP1P01033 207 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 TOP1P11387 765 aaKnown RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 BCKDHAP12694 445 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 CYBAP13498 195 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 CA8P35219 290 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 RDXP35241 583 aaKnown RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 STK19P49842 368 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 PPT1P50897 306 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 ACTR3P61158 418 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 IRX3P78415 501 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 RGS1Q08116 209 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 TFDP1Q14186 410 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 GANABQ14697 944 aaKnown RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 HERPUD1Q15011 391 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 WDR43Q15061 677 aaKnown RBP eCLIP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 CAMK4Q16566 473 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 ZNF699Q32M78 642 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 FAM74A3Q4VXF1 159 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 CAVIN4Q5BKX8 364 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 PNCKQ6P2M8 343 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 LEG1Q6P5S2 330 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 BTNL3Q6UXE8 466 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 Q6ZPB1 254 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 APTXQ7Z2E3 356 aaKnown RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 GRAMD2AQ8IUY3 354 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 CDH26Q8IXH8 852 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 C9orf40Q8IXQ3 194 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 H1FOOQ8IZA3 346 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 CLDN19Q8N6F1 224 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 ANKFN1Q8N957 763 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 FAM133AQ8N9E0 248 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 OR56B2PQ8NGI1 322 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 ADAMTS16Q8TE57 1224 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 IL1F10Q8WWZ1 152 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 SRSF12Q8WXF0 261 aaKnown RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 DLX4Q92988 240 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 RBM14Q96PK6 669 aaKnown RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 FEM1AQ9BSK4 669 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 CNPY3Q9BT09 278 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 COMMD4Q9H0A8 199 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 NXF5Q9H1B4 397 aaKnown RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 ELOVL3Q9HB03 270 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 NANSQ9NR45 359 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 MRPL39Q9NYK5 338 aaKnown RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 GNG12Q9UBI6 72 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 RABL2AQ9UBK7 228 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-210ENST00000553693 SEC14L3Q9UDX4 400 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 LCMT1Q9UIC8 334 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 ZNF221Q9UK13 617 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 CDH9Q9ULB4 789 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 MAB21L2Q9Y586 359 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 ALG6Q9Y672 507 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 MTCH2Q9Y6C9 303 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 PTPRFP10586 1907 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 RLFQ13129 1914 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 FRMPD3Q5JV73 1810 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 MROH5Q6ZUA9 1318 aa2.42□□□□□ -2.02
SCFD1-210ENST00000553693 LOC285556D6RIA3 1793 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 RFX7Q2KHR2 1363 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 METTL21EPA6NDL7 271 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 PDLIM1O00151 329 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 ARPC3O15145 178 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 ZSCAN12O43309 604 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 OR1F1O43749 312 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 DFNA5O60443 496 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 B4GALT2O60909 372 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 SURF6O75683 361 aaKnown RBP2.41□□□□□ -2.02
SCFD1-210ENST00000553693 MMP23AO75900 390 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 IL1BP01584 269 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 TROVE2P10155 538 aaKnown RBP eCLIP2.41□□□□□ -2.02
SCFD1-210ENST00000553693 PNMTP11086 282 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 PAX7P23759 505 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 GABRR1P24046 479 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 MAT2AP31153 395 aaKnown RBP2.41□□□□□ -2.02
SCFD1-210ENST00000553693 RPL4P36578 427 aaKnown RBP2.41□□□□□ -2.02
SCFD1-210ENST00000553693 CAV2P51636 162 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 ACLYP53396 1101 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 AP3M2P53677 418 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 PLA2G16P53816 162 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 KRTAP10-10P60014 251 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 TNFRSF17Q02223 184 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 CNTN2Q02246 1040 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 PLOD1Q02809 727 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-210ENST00000553693 BCL2L1Q07817 233 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms