RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 MOGAT1Q96PD6 335 aa16.3■□□□□ 0.2
CPSF2-202ENST00000553427 CDRT15Q96T59 188 aa16.3■□□□□ 0.2
CPSF2-202ENST00000553427 CLEC4MQ9H2X3 399 aaPredicted RBP16.3■□□□□ 0.2
CPSF2-202ENST00000553427 FKRPQ9H9S5 495 aa16.3■□□□□ 0.2
CPSF2-202ENST00000553427 DCAF13Q9NV06 445 aaKnown RBP16.3■□□□□ 0.2
CPSF2-202ENST00000553427 ASB6Q9NWX5 421 aa16.3■□□□□ 0.2
CPSF2-202ENST00000553427 SEC14L4Q9UDX3 406 aa16.3■□□□□ 0.2
CPSF2-202ENST00000553427 EGFL7Q9UHF1 273 aa16.3■□□□□ 0.2
CPSF2-202ENST00000553427 A4GNTQ9UNA3 340 aa16.3■□□□□ 0.2
CPSF2-202ENST00000553427 SAMD4AQ9UPU9 718 aaKnown RBP16.3■□□□□ 0.2
CPSF2-202ENST00000553427 SPG11Q96JI7 2443 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 HTR3EA5X5Y0 456 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 DEFB108AA8MXU0 73 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 ZNF43P17038 809 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 IGHV1-2P23083 117 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 IFNA8P32881 189 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 MXRA7P84157 204 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 ST3GAL3Q11203 375 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 GLYATQ6IB77 296 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 C22orf34Q6ZV56 151 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 BHLHA15Q7RTS1 189 aaPredicted RBP16.29■□□□□ 0.2
CPSF2-202ENST00000553427 AAED1Q7RTV5 226 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.29■□□□□ 0.2
CPSF2-202ENST00000553427 RNF148Q8N7C7 305 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 RBM15BQ8NDT2 890 aaKnown RBP16.29■□□□□ 0.2
CPSF2-202ENST00000553427 S100PBPQ96BU1 408 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 HS6ST2Q96MM7 605 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 POLDIP3Q9BY77 421 aaKnown RBP16.29■□□□□ 0.2
CPSF2-202ENST00000553427 AMBRA1Q9C0C7 1298 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 SLCO5A1Q9H2Y9 848 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 TAS2R16Q9NYV7 291 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 ZNF229Q9UJW7 825 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 CSMD2Q7Z408 3487 aa16.29■□□□□ 0.2
CPSF2-202ENST00000553427 ANKRD17O75179 2603 aaKnown RBP16.29■□□□□ 0.2
CPSF2-202ENST00000553427 AKAP9Q99996 3911 aa16.28■□□□□ 0.2
CPSF2-202ENST00000553427 B2RBV5 119 aa16.28■□□□□ 0.2
CPSF2-202ENST00000553427 TRAF3IP2O43734 574 aaPredicted RBP16.28■□□□□ 0.2
CPSF2-202ENST00000553427 T-ENOLP0DO92 83 aa16.28■□□□□ 0.2
CPSF2-202ENST00000553427 PTNP21246 168 aa16.28■□□□□ 0.2
CPSF2-202ENST00000553427 PUDPQ08623 228 aa16.28■□□□□ 0.2
CPSF2-202ENST00000553427 C1QTNF12Q5T7M4 302 aa16.28■□□□□ 0.2
CPSF2-202ENST00000553427 ANKRD34AQ69YU3 496 aa16.28■□□□□ 0.2
CPSF2-202ENST00000553427 P2RY8Q86VZ1 359 aa16.28■□□□□ 0.2
CPSF2-202ENST00000553427 UBE2J2Q8N2K1 259 aa16.28■□□□□ 0.2
CPSF2-202ENST00000553427 ZNF433Q8N7K0 673 aaPredicted RBP16.28■□□□□ 0.2
CPSF2-202ENST00000553427 C1orf162Q8NEQ5 155 aaPredicted RBP16.28■□□□□ 0.2
CPSF2-202ENST00000553427 OR5J2Q8NH18 312 aa16.28■□□□□ 0.2
CPSF2-202ENST00000553427 TMEM239Q8WW34 195 aa16.28■□□□□ 0.2
CPSF2-202ENST00000553427 HSD17B8Q92506 261 aa16.28■□□□□ 0.2
CPSF2-202ENST00000553427 MEPEQ9NQ76 525 aaPredicted RBP16.28■□□□□ 0.2
CPSF2-202ENST00000553427 SLC7A10Q9NS82 523 aa16.28■□□□□ 0.2
CPSF2-202ENST00000553427 NOX1Q9Y5S8 564 aa16.28■□□□□ 0.2
CPSF2-202ENST00000553427 SNX13Q9Y5W8 968 aa16.28■□□□□ 0.2
CPSF2-202ENST00000553427 LRRN3E7EW58 273 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 MS4A18H0YCH9 400 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 PLPP3O14495 311 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 SIAH2O43255 324 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 AKAP8O43823 692 aaKnown RBP16.27■□□□□ 0.2
CPSF2-202ENST00000553427 LYZL6O75951 148 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 ZNF432O94892 652 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 IGHV3-9P01782 118 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 MT-ND1P03886 318 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 NQO1P15559 274 aaKnown RBP16.27■□□□□ 0.2
CPSF2-202ENST00000553427 PMS2P3Q13401 168 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 MS4A18Q3C1V0 323 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 BEX5Q5H9J7 111 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 TSPO2Q5TGU0 170 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 NHLRC1Q6VVB1 395 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 FKBP9P1Q75LS8 142 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 TRPM8Q7Z2W7 1104 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 SLC46A3Q7Z3Q1 461 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 ABHD12BQ7Z5M8 362 aaPredicted RBP16.27■□□□□ 0.2
CPSF2-202ENST00000553427 PXKQ7Z7A4 578 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 CDC20BQ86Y33 519 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 NKAIN4Q8IVV8 208 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 UEVLDQ8IX04 471 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 KDM8Q8N371 416 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 C10orf53Q8N6V4 93 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 FAM156AQ8NDB6 213 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 LIPHQ8WWY8 451 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 BOD1Q96IK1 185 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 LINC00470Q9BZP3 86 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 ANKRD19PQ9H560 264 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 NANSQ9NR45 359 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 UPB1Q9UBR1 384 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 ENPP4Q9Y6X5 453 aa16.27■□□□□ 0.2
CPSF2-202ENST00000553427 ENO4A6NNW6 628 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 FFAR1O14842 300 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 ARPC2O15144 300 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 PRSS23O95084 383 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 CH25HO95992 272 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 HPRP00739 348 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 ITGA5P08648 1049 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 ASAH2BP0C7U1 165 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 TCN1P20061 433 aaPredicted RBP16.26■□□□□ 0.19
CPSF2-202ENST00000553427 CBLP22681 906 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 LOXP28300 417 aaPredicted RBP16.26■□□□□ 0.19
CPSF2-202ENST00000553427 MPGP29372 298 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 SELENOPP49908 381 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 UGT2B15P54855 530 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms