RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 BOD1Q96IK1 185 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 ZNF48Q96MX3 618 aaPredicted RBP4.4□□□□□ -1.71
CKAP4-203ENST00000553039 ZNF300Q96RE9 604 aaPredicted RBP4.4□□□□□ -1.71
CKAP4-203ENST00000553039 TINAGL1Q9GZM7 467 aaPredicted RBP4.4□□□□□ -1.71
CKAP4-203ENST00000553039 CENPHQ9H3R5 247 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 TPK1Q9H3S4 243 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 SERHL2Q9H4I8 314 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 ZNF385DQ9H6B1 395 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 ANKZF1Q9H8Y5 726 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 SLC7A10Q9NS82 523 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 KRT84Q9NSB2 600 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 GIMAP4Q9NUV9 329 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 ARGLU1Q9NWB6 273 aaPredicted RBP4.4□□□□□ -1.71
CKAP4-203ENST00000553039 NMRK1Q9NWW6 199 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 ING3Q9NXR8 418 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 NDUFAF4Q9P032 175 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 SENP1Q9P0U3 644 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 MALT1Q9UDY8 824 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 NFU1Q9UMS0 254 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 ANGPTL3Q9Y5C1 460 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 NOX1Q9Y5S8 564 aa4.4□□□□□ -1.71
CKAP4-203ENST00000553039 V9GYY5 206 aaPredicted RBP4.4□□□□□ -1.71
CKAP4-203ENST00000553039 RYR3Q15413 4870 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 IGHV1-18A0A0C4DH31 117 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 NPEPPSL1A6NEC2 478 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 H0YIV9 168 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 H3BNH8 94 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 PDLIM1O00151 329 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 RAB27BO00194 218 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 SULT2B1O00204 365 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 KRT33AO76009 404 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 NUDT14O95848 222 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 IGHV2-5P01817 119 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 PROCP04070 461 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 NGFRP08138 427 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 LINGO3P0C6S8 592 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 PPIAL4GP0DN37 164 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 RAC2P15153 192 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 TCN1P20061 433 aaPredicted RBP4.39□□□□□ -1.71
CKAP4-203ENST00000553039 LORP23490 312 aaPredicted RBP4.39□□□□□ -1.71
CKAP4-203ENST00000553039 CALRP27797 417 aaKnown RBP4.39□□□□□ -1.71
CKAP4-203ENST00000553039 LCN1P31025 176 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 MAGEA8P43361 318 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 PTDSS1P48651 473 aaKnown RBP4.39□□□□□ -1.71
CKAP4-203ENST00000553039 SLC12A2P55011 1212 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 PROK1P58294 105 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 KRTAP10-3P60369 221 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 TRA2BP62995 288 aaKnown RBP4.39□□□□□ -1.71
CKAP4-203ENST00000553039 LCN2P80188 198 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 PSG6Q00889 435 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 SLC18A2Q05940 514 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 SLC3A1Q07837 685 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 C2orf54Q08AI8 447 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 ZNF154Q13106 437 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 TSNQ15631 228 aaKnown RBP4.39□□□□□ -1.71
CKAP4-203ENST00000553039 MOGQ16653 247 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 HFEQ30201 348 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 PCGF3Q3KNV8 242 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 GLE1Q53GS7 698 aaKnown RBP4.39□□□□□ -1.71
CKAP4-203ENST00000553039 C8orf74Q6P047 294 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 NPSR1Q6W5P4 371 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 TMPPEQ6ZT21 453 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 PRUNE1Q86TP1 453 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 POMGNT2Q8NAT1 580 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 SPATA4Q8NEY3 305 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 OR4S1Q8NGB4 309 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 POC1BQ8TC44 478 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 DYRK2Q92630 601 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 ESAMQ96AP7 390 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 MOGAT1Q96PD6 335 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 SYT3Q9BQG1 590 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 FUZQ9BT04 418 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 NAT9Q9BTE0 207 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 TXLNGYQ9BZA5 131 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 RTN4RQ9BZR6 473 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 PPANQ9NQ55 473 aaKnown RBP4.39□□□□□ -1.71
CKAP4-203ENST00000553039 UBQLN4Q9NRR5 601 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 OPTCQ9UBM4 332 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 SEC14L4Q9UDX3 406 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 POMT1Q9Y6A1 747 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 U3KQK5 164 aa4.39□□□□□ -1.71
CKAP4-203ENST00000553039 TENM2Q9NT68 2774 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 LCE6AA0A183 80 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 TCRBV7S2A1N4TA0A589 114 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 K7EPI3 171 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 GTPBP1O00178 669 aaKnown RBP4.38□□□□□ -1.71
CKAP4-203ENST00000553039 EFNA2O43921 213 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 UGDHO60701 494 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 CYP7B1O75881 506 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 ZNF432O94892 652 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 ZFPL1O95159 310 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 ESRRBO95718 433 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 HSPA4LO95757 839 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 FGGP02679 453 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 JUNP05412 331 aaKnown RBP4.38□□□□□ -1.71
CKAP4-203ENST00000553039 NR2F1P10589 423 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 CBR1P16152 277 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 ZNF37AP17032 561 aaPredicted RBP4.38□□□□□ -1.71
CKAP4-203ENST00000553039 NR4A1P22736 598 aa4.38□□□□□ -1.71
CKAP4-203ENST00000553039 EDNRAP25101 427 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms