RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 LSP1P33241 339 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 LSM11P83369 360 aaKnown RBP eCLIP8.58□□□□□ -1.04
HDAC7-229ENST00000549883 MAPRE2Q15555 327 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 HIKESHIQ53FT3 197 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 FAM69AQ5T7M9 428 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 FAM91A1Q658Y4 838 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 C8orf82Q6P1X6 216 aaPredicted RBP8.58□□□□□ -1.04
HDAC7-229ENST00000549883 NIPAL3Q6P499 406 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 ZNF613Q6PF04 617 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 RANBP3LQ86VV4 465 aaPredicted RBP8.58□□□□□ -1.04
HDAC7-229ENST00000549883 LRRC17Q8N6Y2 441 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 BHLHE22Q8NFJ8 381 aaPredicted RBP8.58□□□□□ -1.04
HDAC7-229ENST00000549883 SLC26A7Q8TE54 656 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 ADAMTS16Q8TE57 1224 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 SLC41A3Q96GZ6 507 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 TXNDC15Q96J42 360 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 OXGR1Q96P68 337 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 CCL19Q99731 98 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 EMC6Q9BV81 110 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 TMUB1Q9BVT8 246 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 AMBRA1Q9C0C7 1298 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 PARPBPQ9NWS1 579 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 UPB1Q9UBR1 384 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 PRDM4Q9UKN5 801 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 SLC7A7Q9UM01 511 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 RASD1Q9Y272 281 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 SH3GLB1Q9Y371 365 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 RNF115Q9Y4L5 304 aa8.58□□□□□ -1.04
HDAC7-229ENST00000549883 FAM220BPB1ANY3 271 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 SLC22A2O15244 555 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 CHP2O43745 196 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 FMO6PO60774 539 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 SERPINI2O75830 405 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 SEC14L2O76054 403 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 CH25HO95992 272 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 NPPAP01160 153 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 CD3EP07766 207 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 SOD3P08294 240 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 MPGP29372 298 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 SLC7A2P52569 658 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 NR1H2P55055 460 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 TUBA1BP68363 451 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 TUBA4AP68366 448 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 NKX6-1P78426 367 aaPredicted RBP8.57□□□□□ -1.04
HDAC7-229ENST00000549883 IL1RL1Q01638 556 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 LIPEQ05469 1076 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 PGGHGQ32M88 737 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 LRRC23Q53EV4 343 aaPredicted RBP8.57□□□□□ -1.04
HDAC7-229ENST00000549883 CYBRD1Q53TN4 286 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 INTS11Q5TA45 600 aaKnown RBP8.57□□□□□ -1.04
HDAC7-229ENST00000549883 CARD17Q5XLA6 110 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 B3GLCTQ6Y288 498 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 DEF8Q6ZN54 512 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 TUBA1AQ71U36 451 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 H1FNTQ75WM6 255 aaPredicted RBP8.57□□□□□ -1.04
HDAC7-229ENST00000549883 NKAIN4Q8IVV8 208 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 SLC30A8Q8IWU4 369 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 MICU2Q8IYU8 434 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 C10orf53Q8N6V4 93 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 PCYOX1LQ8NBM8 494 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 OR2T12Q8NG77 320 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 RP9Q8TA86 221 aaKnown RBP8.57□□□□□ -1.04
HDAC7-229ENST00000549883 MUCL1Q96DR8 90 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 PERPQ96FX8 193 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 SH3GL1Q99961 368 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 TMEM43Q9BTV4 400 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 NELFAQ9H3P2 528 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 GSX1Q9H4S2 264 aaPredicted RBP8.57□□□□□ -1.04
HDAC7-229ENST00000549883 ESRP2Q9H6T0 727 aaKnown RBP8.57□□□□□ -1.04
HDAC7-229ENST00000549883 SEC61A2Q9H9S3 476 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 MEPEQ9NQ76 525 aaPredicted RBP8.57□□□□□ -1.04
HDAC7-229ENST00000549883 DLL4Q9NR61 685 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 SLC17A5Q9NRA2 495 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 BEX4Q9NWD9 120 aaPredicted RBP8.57□□□□□ -1.04
HDAC7-229ENST00000549883 GID8Q9NWU2 228 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 MED29Q9NX70 200 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 LAMP3Q9UQV4 416 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 SNX13Q9Y5W8 968 aa8.57□□□□□ -1.04
HDAC7-229ENST00000549883 MAP1AP78559 2803 aaPredicted RBP8.57□□□□□ -1.04
HDAC7-229ENST00000549883 ZNF469Q96JG9 3925 aaPredicted RBP8.56□□□□□ -1.04
HDAC7-229ENST00000549883 A0A096LPE4 126 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 A0A1W2PPZ6 126 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 ELOVL7A1L3X0 281 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 TRAPPC13A5PLN9 417 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 ZNF503-AS2A6NEH8 195 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 C11orf98E9PRG8 122 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 M0R1B8 84 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 PLPP3O14495 311 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 ABCD4O14678 606 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 OR2T1O43869 369 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 SNX3O60493 162 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 CCDC22O60826 627 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 SMPD2O60906 423 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 NDUFS7O75251 213 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 VAMP5O95183 116 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 DANCRP0C864 163 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 CD99P14209 185 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 NQO1P15559 274 aaKnown RBP8.56□□□□□ -1.04
HDAC7-229ENST00000549883 NCK1P16333 377 aa8.56□□□□□ -1.04
HDAC7-229ENST00000549883 ZNF43P17038 809 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms