RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 RAB34Q9BZG1 259 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 PALMDQ9NP74 551 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 MIEF1Q9NQG6 463 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 XPNPEP1Q9NQW7 623 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 RSPH14Q9UHP6 348 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 NEUROG3Q9Y4Z2 214 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 MAB21L2Q9Y586 359 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 TRANK1O15050 2925 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 ZFHX4Q86UP3 3567 aa3.03□□□□□ -1.92
PTCH1-216ENST00000548379 BAZ2AQ9UIF9 1905 aaKnown RBP3.03□□□□□ -1.92
PTCH1-216ENST00000548379 NID2Q14112 1375 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 A0A1W2PNV4 684 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 OR6C65A6NJZ3 312 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 H0YCG3 227 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 BTN3A3O00478 584 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 TRDMT1O14717 391 aaKnown RBP3.02□□□□□ -1.93
PTCH1-216ENST00000548379 PHOX2AO14813 284 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 RIPK2O43353 540 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 BCAS1O75363 584 aaPredicted RBP3.02□□□□□ -1.93
PTCH1-216ENST00000548379 SPAG6O75602 509 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 SCRG1O75711 98 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 PALMO75781 387 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 NOL4O94818 638 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 F10P00742 488 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 OPN1MWP04001 364 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 OPN1MW2P0DN77 364 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 OPN1MW3P0DN78 364 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 MCF2P10911 925 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 PTBP1P26599 531 aaKnown RBP eCLIP3.02□□□□□ -1.93
PTCH1-216ENST00000548379 GABRR2P28476 465 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 CCR2P41597 374 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 MAGEA5P43359 124 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 DHPSP49366 369 aaPredicted RBP3.02□□□□□ -1.93
PTCH1-216ENST00000548379 STARP49675 285 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 PPT1P50897 306 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 PLA2G16P53816 162 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 KRTAP10-7P60409 375 aaPredicted RBP3.02□□□□□ -1.93
PTCH1-216ENST00000548379 EWSR1Q01844 656 aaKnown RBP eCLIP3.02□□□□□ -1.93
PTCH1-216ENST00000548379 CD47Q08722 323 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 SMARCB1Q12824 385 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 ASAH1Q13510 395 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 DMC1Q14565 340 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 LAGE3Q14657 143 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 PDGFRLQ15198 375 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 PRR4Q16378 134 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 KYAT1Q16773 422 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 SLC5A12Q1EHB4 618 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 FAM71F2Q6NXP2 309 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 FAHD2BQ6P2I3 314 aaPredicted RBP3.02□□□□□ -1.93
PTCH1-216ENST00000548379 SCYL2Q6P3W7 929 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 RUFY3Q7L099 469 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 DEFB124Q8NES8 71 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 OR2T3Q8NH03 318 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 CNIH3Q8TBE1 160 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 C2orf15Q8WU43 125 aaKnown RBP3.02□□□□□ -1.93
PTCH1-216ENST00000548379 IL1F10Q8WWZ1 152 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 SHC3Q92529 594 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 MRPS31Q92665 395 aaKnown RBP3.02□□□□□ -1.93
PTCH1-216ENST00000548379 PSMG2Q969U7 264 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 SDSLQ96GA7 329 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 FAHD2AQ96GK7 314 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 OR5M11Q96RB7 305 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 P2RY13Q9BPV8 354 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 C19orf24Q9BVV8 132 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 POLR1EQ9GZS1 481 aaKnown RBP3.02□□□□□ -1.93
PTCH1-216ENST00000548379 PPDPFQ9H3Y8 114 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 SLC7A10Q9NS82 523 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 SPRR3Q9UBC9 169 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 UBQLN1Q9UMX0 589 aaKnown RBP3.02□□□□□ -1.93
PTCH1-216ENST00000548379 OR10H1Q9Y4A9 318 aa3.02□□□□□ -1.93
PTCH1-216ENST00000548379 TECTAO75443 2155 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 RALGAPA2Q2PPJ7 1873 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 GBF1Q92538 1859 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 FAM168BA1KXE4 195 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 PP2D1A8MPX8 630 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 A8MUI8 341 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 GPR89AB7ZAQ6 455 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 E9PLD3 99 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 TM7SF2O76062 418 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 SNX4O95219 450 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 GPR89BP0CG08 455 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 KCNE1P15382 129 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 ZP3P21754 424 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 GDF1P27539 372 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 CCT6AP40227 531 aaKnown RBP3.01□□□□□ -1.93
PTCH1-216ENST00000548379 GNPDA1P46926 289 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 RGS4P49798 205 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 PJVKQ0ZLH3 352 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 ST3GAL3Q11203 375 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 RAB40BQ12829 278 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 ORC2Q13416 577 aaPredicted RBP3.01□□□□□ -1.93
PTCH1-216ENST00000548379 SYPL1Q16563 259 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 PDK4Q16654 411 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 NDUFA9Q16795 377 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 MAJINQ3KP22 176 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 METTL11BQ5VVY1 283 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 OR8G2PQ6IF36 304 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 CENPPQ6IPU0 288 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 ACSM5Q6NUN0 579 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 CD302Q8IX05 232 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms