RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 GLCEO94923 617 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 MT-ND5P03915 603 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 SBK2P0C263 348 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 SLC2A5P22732 501 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 PAX7P23759 505 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 SOX6P35712 828 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 PLA2G5P39877 138 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 DAP3P51398 398 aaKnown RBP12.16□□□□□ -0.46
PTCH1-215ENST00000547672 RRADP55042 308 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 RPL27P61353 136 aaKnown RBP12.16□□□□□ -0.46
PTCH1-215ENST00000547672 ACTA2P62736 377 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 ACTG2P63267 376 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 ROR2Q01974 943 aaKnown RBP12.16□□□□□ -0.46
PTCH1-215ENST00000547672 MRPL28Q13084 256 aaKnown RBP12.16□□□□□ -0.46
PTCH1-215ENST00000547672 SELENBP1Q13228 472 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 TSTQ16762 297 aaKnown RBP12.16□□□□□ -0.46
PTCH1-215ENST00000547672 OR5M10Q6IEU7 315 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 C19orf48Q6RUI8 117 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 KCTD20Q7Z5Y7 419 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 ARIH2OSQ8N7S6 290 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 CLEC1AQ8NC01 280 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 NPEPL1Q8NDH3 523 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 ADPRHL1Q8NDY3 354 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 OR51G2Q8NGK0 314 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 MOSPD2Q8NHP6 518 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 OR5M11Q96RB7 305 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 CNN2Q99439 309 aaKnown RBP12.16□□□□□ -0.46
PTCH1-215ENST00000547672 ARHGAP9Q9BRR9 750 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 TXNIPQ9H3M7 391 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 SH2D2AQ9NP31 389 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 KLHL1Q9NR64 748 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 ALKBH4Q9NXW9 302 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 STMN3Q9NZ72 180 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 CLEC2DQ9UHP7 191 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 A3GALT2U3KPV4 340 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 KIF26BQ2KJY2 2108 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 ZNF318Q5VUA4 2279 aa12.16□□□□□ -0.46
PTCH1-215ENST00000547672 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-215ENST00000547672 A0A1W2PPW3 197 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 PCNX2A6NKB5 2137 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 LINC01387J3KSC0 135 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 J3QRE1 110 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 IGHMP01871 453 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 LIMS3P0CW19 117 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 LIMS4P0CW20 117 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 ZNF17P17021 662 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 AHCYP23526 432 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 CRABP1P29762 137 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 GRPRP30550 384 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 TGFBR2P37173 567 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 RPS18P62269 152 aaKnown RBP12.15□□□□□ -0.46
PTCH1-215ENST00000547672 GABREP78334 506 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 LTBQ06643 244 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 KRR1Q13601 381 aaKnown RBP12.15□□□□□ -0.46
PTCH1-215ENST00000547672 TIGD3Q6B0B8 471 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 LEG1Q6P5S2 330 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 DNM1P34Q6PK57 102 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 FAM122BQ7Z309 247 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 LHFPL3Q86UP9 236 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 GTPBP8Q8N3Z3 284 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-215ENST00000547672 BBS1Q8NFJ9 593 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 OR10H4Q8NGA5 316 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 THAP4Q8WY91 577 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 SMPDL3BQ92485 455 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 NKD1Q969G9 470 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 NTNG2Q96CW9 530 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 THOC3Q96J01 351 aaKnown RBP12.15□□□□□ -0.46
PTCH1-215ENST00000547672 PIGQQ9BRB3 760 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 DCUN1D5Q9BTE7 237 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 PTDSS2Q9BVG9 487 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 NMNAT2Q9BZQ4 307 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 NAA50Q9GZZ1 169 aaKnown RBP12.15□□□□□ -0.46
PTCH1-215ENST00000547672 TRIM36Q9NQ86 728 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 NDUFB11Q9NX14 153 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 BABAM2Q9NXR7 383 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 TAS2R5Q9NYW4 299 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 STUB1Q9UNE7 303 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 VDAC3Q9Y277 283 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 TMEM14AQ9Y6G1 99 aa12.15□□□□□ -0.46
PTCH1-215ENST00000547672 TEX13CA0A0J9YWL9 993 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 C2orf72A6NCS6 295 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 CCDC182A6NF36 153 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 C12orf71A8MTZ7 269 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 LRRN3E7EW58 273 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 PHYHO14832 338 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 EIF1BO60739 113 aaKnown RBP12.14□□□□□ -0.47
PTCH1-215ENST00000547672 FZD7O75084 574 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 CLPXO76031 633 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 HLA-DPB1P04440 258 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 TACSTD2P09758 323 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 NR2C1P13056 603 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 LIFP15018 202 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 SPI1P17947 270 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 CNR1P21554 472 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 GADD45AP24522 165 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 DPP4P27487 766 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 PCSK6P29122 969 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 PEX19P40855 299 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 SLC35A1P78382 337 aa12.14□□□□□ -0.47
PTCH1-215ENST00000547672 TLE3Q04726 772 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms