RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 UNC93AQ86WB7 457 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 OR2AK2Q8NG84 335 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 GPR152Q8TDT2 470 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 FTHL17Q9BXU8 183 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 SLC38A1Q9H2H9 487 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 ZFP64Q9NPA5 681 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 UBQLN4Q9NRR5 601 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 USE1Q9NZ43 259 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 USP22Q9UPT9 525 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 A0A1W2PP18 115 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 TTC24A2A3L6 582 aaPredicted RBP8.2□□□□□ -1.1
VPS13D-212ENST00000543766 DCDC2BA2VCK2 349 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 SOWAHBA6NEL2 793 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 LEFTY2O00292 366 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 PPP1R2P9O14990 202 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 GRID2O43424 1007 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 DDAH2O95865 285 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 ABHD16AO95870 558 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 SNHG28P0DPA3 235 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 ADORA2AP29274 412 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 VAMP7P51809 220 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 TMPRSS3P57727 454 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 ERVS71-1P61550 626 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 PTSQ03393 145 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 CRHR2Q13324 411 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 N4BP2L1Q5TBK1 243 aaPredicted RBP8.2□□□□□ -1.1
VPS13D-212ENST00000543766 STEAP1BQ6NZ63 245 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 TSPAN33Q86UF1 283 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 P2RY8Q86VZ1 359 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 LSRQ86X29 649 aaPredicted RBP8.2□□□□□ -1.1
VPS13D-212ENST00000543766 PHF13Q86YI8 300 aaPredicted RBP8.2□□□□□ -1.1
VPS13D-212ENST00000543766 PELI3Q8N2H9 469 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 EDEM1Q92611 657 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 GTSF1LQ9H1H1 148 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 STEAP1Q9UHE8 339 aa8.2□□□□□ -1.1
VPS13D-212ENST00000543766 NPIPB15A6NHN6 443 aaPredicted RBP8.19□□□□□ -1.1
VPS13D-212ENST00000543766 UBFD1O14562 309 aaKnown RBP8.19□□□□□ -1.1
VPS13D-212ENST00000543766 TCL1AP56279 114 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 FKBP1AP62942 108 aaKnown RBP8.19□□□□□ -1.1
VPS13D-212ENST00000543766 TTLL4Q14679 1199 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 TXNRD3NBQ6F5E7 133 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 HACD2Q6Y1H2 254 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 LRRC28Q86X40 367 aaPredicted RBP8.19□□□□□ -1.1
VPS13D-212ENST00000543766 TMEM185AQ8NFB2 350 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 PIK3IP1Q96FE7 263 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 SENP5Q96HI0 755 aaPredicted RBP8.19□□□□□ -1.1
VPS13D-212ENST00000543766 ZNF582Q96NG8 517 aaPredicted RBP8.19□□□□□ -1.1
VPS13D-212ENST00000543766 SIGLEC11Q96RL6 698 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 TMEM209Q96SK2 561 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 NICN1Q9BSH3 213 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 COA1Q9GZY4 146 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 MSL2Q9HCI7 577 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 OR7A17O14581 309 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 OR7C2O60412 319 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 LIPCP11150 499 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 SLC6A4P31645 630 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 BMP8BP34820 402 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 SEC61GP60059 68 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 SRSF7Q16629 238 aaKnown RBP eCLIP8.19□□□□□ -1.1
VPS13D-212ENST00000543766 MED27Q6P2C8 311 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 FAM220AQ7Z4H9 259 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 BMP8AQ7Z5Y6 402 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 LRRTM1Q86UE6 522 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 OR10G3Q8NGC4 313 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 OR2V1Q8NHB1 315 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 ARRDC2Q8TBH0 407 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 TMEM159Q96B96 161 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 HAVCR1Q96D42 359 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 DGAT2Q96PD7 388 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 ATF6BQ99941 703 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 ENY2Q9NPA8 101 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 GPATCH2Q9NW75 528 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 ADA2Q9NZK5 511 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 OR2W5A6NFC9 320 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 CFHP08603 1231 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 ITGB5P18084 799 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 PSMB10P40306 273 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 CYP2J2P51589 502 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 SHC2P98077 582 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 EML3Q32P44 896 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 SPIN3Q5JUX0 258 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 DCAF12L2Q5VW00 463 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 ZNF585AQ6P3V2 769 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 GPRIN1Q7Z2K8 1008 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 TRIM46Q7Z4K8 759 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 PARGQ86W56 976 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 ZNF480Q8WV37 535 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 ARNTL2Q8WYA1 636 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 RTP4Q96DX8 246 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 MVB12AQ96EY5 273 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 LPAR5Q9H1C0 372 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 OR52A5Q9H2C5 316 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 MBNL1Q9NR56 388 aaKnown RBP8.19□□□□□ -1.1
VPS13D-212ENST00000543766 NEU3Q9UQ49 428 aa8.19□□□□□ -1.1
VPS13D-212ENST00000543766 G3V2L1 256 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 G3V3G9 751 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 SELENOFO60613 162 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 FABP3P05413 133 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 GTF2F2P13984 249 aa8.18□□□□□ -1.1
VPS13D-212ENST00000543766 ZNF44P15621 663 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms