RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 OR10H2O60403 315 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 SOX30O94993 753 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 IL3P08700 152 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 POU3F2P20265 443 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 AK4P27144 223 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 BDKRB2P30411 391 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 CRYBA2P53672 197 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 HBA1P69905 142 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 MRPS11P82912 194 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 NHLH2Q02577 135 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 RBBP4Q09028 425 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 ZIC1Q15915 447 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 NTRK2Q16620 822 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 ACTBL2Q562R1 376 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 MRM1Q6IN84 353 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 KLHL24Q6TFL4 600 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 ENPP7Q6UWV6 458 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 TMEM107Q6UX40 140 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 ALKAL2Q6UX46 152 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 OR10A7Q8NGE5 316 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 FLVCR1-AS1Q8TAF5 88 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 TSACCQ96A04 125 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 MRGPRX4Q96LA9 322 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 SFXN2Q96NB2 322 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 CMSS1Q9BQ75 279 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 ARHGAP9Q9BRR9 750 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 REG4Q9BYZ8 158 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 C6orf106Q9H6K1 298 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 TPT1P8Q9HAU6 139 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 GPR27Q9NS67 375 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 NLGN3Q9NZ94 848 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 TAAR2Q9P1P5 351 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 F5P12259 2224 aa7.36□□□□□ -1.23
PDLIM5-221ENST00000542407 FAM74A7A6NL05 159 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 EEF1E1O43324 174 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 KCNAB3O43448 404 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 TBX19O60806 448 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 PRAMEF2O60811 474 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 CTAG2O75638 210 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 GADD45GO95257 159 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 LPLP06858 475 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 SRFP11831 508 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 PPP2R1BP30154 601 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 BCL6P41182 706 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 MPPED2Q15777 294 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 FAM74A3Q4VXF1 159 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 C4orf48Q5BLP8 95 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 OR2G6Q5TZ20 316 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 ACSM5Q6NUN0 579 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 SPNS3Q6ZMD2 512 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 C3P1Q6ZMU1 363 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 OR2T4Q8NH00 348 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 HMGB4Q8WW32 186 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 PIGKQ92643 395 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 TM4SF18Q96CE8 201 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 R3HDM4Q96D70 268 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 NLNQ9BYT8 704 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 METTL17Q9H7H0 456 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 PARD6AQ9NPB6 346 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 SLC35D1Q9NTN3 355 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 CLCA2Q9UQC9 943 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 DNAH14Q0VDD8 3507 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 A0A1W2PPQ1 181 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 TRBC2A0A5B9 178 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 KDM4EB2RXH2 506 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 TLR4O00206 839 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 NDUFS4O43181 175 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 SEMA4FO95754 770 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 FOSL2P15408 326 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 RFC3P40938 356 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 MAGEB1P43366 347 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 EVX1P49640 407 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 YPEL5P62699 121 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 OPCMLQ14982 345 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 RGNQ15493 299 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 PNLIPRP3Q17RR3 467 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 TMEM17Q86X19 198 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 PRSS35Q8N3Z0 413 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 RAB42Q8N4Z0 105 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 AMER3Q8N944 861 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 ZNF383Q8NA42 475 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 OR4A15Q8NGL6 344 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 ORAI3Q9BRQ5 295 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 DOHHQ9BU89 302 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 TSSK6Q9BXA6 273 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 ZNF436Q9C0F3 470 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 TBC1D17Q9HA65 648 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 SOHLH2Q9NX45 425 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 GSTK1Q9Y2Q3 226 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 LSM2Q9Y333 95 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 HEBP2Q9Y5Z4 205 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 HS3ST3A1Q9Y663 406 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 A0A0A6YYD5 115 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 OR1F1O43749 312 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 TMPRSS11DO60235 418 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 CLEC3AO75596 197 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 GCM2O75603 506 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 C6orf47O95873 294 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 LGI1O95970 557 aa7.35□□□□□ -1.23
PDLIM5-221ENST00000542407 LALBAP00709 142 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms