RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 LINC00114Q6XXX2 140 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 COX15Q7KZN9 410 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 OAFQ86UD1 273 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 GTF2IRD2Q86UP8 949 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 P2RY8Q86VZ1 359 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 CDC20BQ86Y33 519 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 RAB43Q86YS6 212 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 CADM2Q8N3J6 435 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 LNX2Q8N448 690 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 TCEANCQ8N8B7 351 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 PSD4Q8NDX1 1056 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 PROKR2Q8NFJ6 384 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 OR6S1Q8NH40 331 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 OR5W2Q8NH69 310 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 ZNF563Q8TA94 476 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 M1APQ8TC57 530 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 FANK1Q8TC84 345 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 HAVCR2Q8TDQ0 301 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 LIPHQ8WWY8 451 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 ST8SIA1Q92185 356 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 GGHQ92820 318 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 TSLPQ969D9 159 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 OMA1Q96E52 524 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 FAM46AQ96IP4 442 aaKnown RBP7.57□□□□□ -1.2
CHD4-208ENST00000540960 LRR1Q96L50 414 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 COG8Q96MW5 612 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 IP6K3Q96PC2 410 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 NXF5Q9H1B4 397 aaKnown RBP7.57□□□□□ -1.2
CHD4-208ENST00000540960 CLEC4MQ9H2X3 399 aaPredicted RBP7.57□□□□□ -1.2
CHD4-208ENST00000540960 ISYNA1Q9NPH2 558 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 ERVK-18Q9QC07 812 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 CTSFQ9UBX1 484 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 KCNE5Q9UJ90 142 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 ZNF223Q9UK11 482 aaPredicted RBP7.57□□□□□ -1.2
CHD4-208ENST00000540960 DIMT1Q9UNQ2 313 aaKnown RBP7.57□□□□□ -1.2
CHD4-208ENST00000540960 ZNF835Q9Y2P0 537 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 ZNF337Q9Y3M9 751 aa7.57□□□□□ -1.2
CHD4-208ENST00000540960 SPIN1Q9Y657 262 aaPredicted RBP7.57□□□□□ -1.2
CHD4-208ENST00000540960 A0A1W2PQ72 361 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 A8MUA0 341 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 KDM4EB2RXH2 506 aaPredicted RBP7.56□□□□□ -1.2
CHD4-208ENST00000540960 MYL12BO14950 172 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 FRS3O43559 492 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 OR2T1O43869 369 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 TRIM3O75382 744 aaPredicted RBP7.56□□□□□ -1.2
CHD4-208ENST00000540960 SLC25A12O75746 678 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 SOX14O95416 240 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 BCL10O95999 233 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 IGKV1D-16P01601 117 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 MT-ND2P03891 347 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 CLPSP04118 112 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 GKN3PP0CG01 181 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 PCMT1P22061 227 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 CXCR1P25024 350 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 PSMB9P28065 219 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 ABCD3P28288 659 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 EPHA2P29317 976 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 NOS3P29474 1203 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 HTR1FP30939 366 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 FOLR3P41439 243 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 SLC15A1P46059 708 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 MTNR1AP48039 350 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 P2RX1P51575 399 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 BLVRAP53004 296 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 ACTC1P68032 377 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 ACTA1P68133 377 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 ROR2Q01974 943 aaKnown RBP7.56□□□□□ -1.2
CHD4-208ENST00000540960 RBPJQ06330 500 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 SNTA1Q13424 505 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 LSAMPQ13449 338 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 PDLIM3Q53GG5 364 aaPredicted RBP7.56□□□□□ -1.2
CHD4-208ENST00000540960 SYT14P1Q58G82 188 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 EMC4Q5J8M3 183 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 LCN1P1Q5VSP4 162 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 ZNF385CQ66K41 422 aaPredicted RBP7.56□□□□□ -1.2
CHD4-208ENST00000540960 XAF1Q6GPH4 301 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 LAIR2Q6ISS4 152 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 MRPL14Q6P1L8 145 aaKnown RBP7.56□□□□□ -1.2
CHD4-208ENST00000540960 OPN5Q6U736 354 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 PAMR1Q6UXH9 720 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 TMPRSS11AQ6ZMR5 421 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 DPY19L2P2Q6ZN68 376 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 LINC00696Q6ZRV3 163 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 COMTD1Q86VU5 262 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 CCDC71Q8IV32 467 aaPredicted RBP7.56□□□□□ -1.2
CHD4-208ENST00000540960 NKAIN4Q8IVV8 208 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 GPALPP1Q8IXQ4 340 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 TMCO5AQ8N6Q1 288 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 ZNF441Q8N8Z8 693 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 KBTBD8Q8NFY9 601 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 OR4N2Q8NGD1 307 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 OR2Y1Q8NGV0 311 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 OR4C3Q8NH37 302 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 TMEM255BQ8WV15 326 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.56□□□□□ -1.2
CHD4-208ENST00000540960 APH1BQ8WW43 257 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 NMD3Q96D46 503 aaKnown RBP7.56□□□□□ -1.2
CHD4-208ENST00000540960 SIGLEC11Q96RL6 698 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 ADOQ96SZ5 270 aa7.56□□□□□ -1.2
CHD4-208ENST00000540960 COQ7Q99807 217 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms