RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 ORC5O43913 435 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 CSO75390 466 aaKnown RBP8.75□□□□□ -1.01
TTC39C-203ENST00000540918 STK17BO94768 372 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 CALCBP10092 127 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 IL32P24001 234 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 TGFBR2P37173 567 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 PCBP4P57723 403 aaKnown RBP8.75□□□□□ -1.01
TTC39C-203ENST00000540918 RNF4P78317 190 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 C1QL3Q5VWW1 255 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 LRRC69Q6ZNQ3 347 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 DGAT2L6Q6ZPD8 337 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 KCTD9Q7L273 389 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 GLB1L2Q8IW92 636 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 SHISA5Q8N114 240 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 CLDN22Q8N7P3 220 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 SLC6A7Q99884 636 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 C19orf43Q9BQ61 176 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 SLC22A4Q9H015 551 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 SACM1LQ9NTJ5 587 aa8.75□□□□□ -1.01
TTC39C-203ENST00000540918 COA3Q9Y2R0 106 aaPredicted RBP8.75□□□□□ -1.01
TTC39C-203ENST00000540918 FAM230AA0A1W2PPH8 454 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 hCG_1807616A0A1W2PRN6 198 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 SYT5O00445 386 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 KDM4BO94953 1096 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 GTF2F2P13984 249 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 SPINK2P20155 84 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 PRPH2P23942 346 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 MAGEA8P43361 318 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 NOVA1P51513 510 aaKnown RBP8.74□□□□□ -1.01
TTC39C-203ENST00000540918 PRSS12P56730 875 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 INSL4Q14641 139 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 SLC22A6Q4U2R8 563 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 MANEAQ5SRI9 462 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 C1orf140Q5VVS0 124 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 B3GNTL1Q67FW5 361 aaPredicted RBP8.74□□□□□ -1.01
TTC39C-203ENST00000540918 PAMR1Q6UXH9 720 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 BHLHE23Q8NDY6 225 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 SPACA5Q96QH8 159 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 WFDC6Q9BQY6 131 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 UTP23Q9BRU9 249 aaKnown RBP8.74□□□□□ -1.01
TTC39C-203ENST00000540918 NAA11Q9BSU3 229 aaPredicted RBP8.74□□□□□ -1.01
TTC39C-203ENST00000540918 NDRG4Q9ULP0 352 aaKnown RBP8.74□□□□□ -1.01
TTC39C-203ENST00000540918 A4GNTQ9UNA3 340 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 EXO1Q9UQ84 846 aaKnown RBP8.74□□□□□ -1.01
TTC39C-203ENST00000540918 MMACHCQ9Y4U1 282 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 PKDREJQ9NTG1 2253 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 NOTCH2Q04721 2471 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 DDAH2O95865 285 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 ZNF12P17014 697 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 PPICP45877 212 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 CYB561P49447 251 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 ACTA2P62736 377 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 ACTG2P63267 376 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 SLC35A2P78381 396 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 BCL2L15Q5TBC7 163 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 VHLLQ6RSH7 139 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 LAX1Q8IWV1 398 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 SLC25A45Q8N413 288 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 BEST4Q8NFU0 473 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 OR10G3Q8NGC4 313 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 TEAD3Q99594 435 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 EMC7Q9NPA0 242 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 TMEM9BQ9NQ34 198 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 ZNF226Q9NYT6 803 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 TBC1D24Q9ULP9 559 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 POLHQ9Y253 713 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 B3GALT1Q9Y5Z6 326 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 METTL21EPA6NDL7 271 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 C5orf51A6NDU8 294 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 PRAMEF25A6NGN4 478 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 C17orf51A8MQB3 221 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 DSCR3O14972 297 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 MPIG6BO95866 241 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 ECDO95905 644 aaPredicted RBP8.74□□□□□ -1.01
TTC39C-203ENST00000540918 MAGEB1P43366 347 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 SPIN3Q5JUX0 258 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 C6orf15Q6UXA7 325 aaPredicted RBP8.74□□□□□ -1.01
TTC39C-203ENST00000540918 TMPPEQ6ZT21 453 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 FAM57BQ71RH2 274 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 PRR18Q8N4B5 295 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 DNAAF1Q8NEP3 725 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 OR13C9Q8NGT0 318 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 EMC9Q9Y3B6 208 aa8.74□□□□□ -1.01
TTC39C-203ENST00000540918 SPAARA0A1B0GVQ0 90 aa8.73□□□□□ -1.01
TTC39C-203ENST00000540918 HTR3EA5X5Y0 456 aa8.73□□□□□ -1.01
TTC39C-203ENST00000540918 LILRA5A6NI73 299 aa8.73□□□□□ -1.01
TTC39C-203ENST00000540918 GABRPO00591 440 aa8.73□□□□□ -1.01
TTC39C-203ENST00000540918 HSPA12AO43301 675 aa8.73□□□□□ -1.01
TTC39C-203ENST00000540918 ZNF208O43345 1280 aa8.73□□□□□ -1.01
TTC39C-203ENST00000540918 CD14P08571 375 aa8.73□□□□□ -1.01
TTC39C-203ENST00000540918 LINC00271P0C7V0 271 aa8.73□□□□□ -1.01
TTC39C-203ENST00000540918 ZNF16P17020 682 aaPredicted RBP8.73□□□□□ -1.01
TTC39C-203ENST00000540918 ENDOUP21128 410 aaKnown RBP8.73□□□□□ -1.01
TTC39C-203ENST00000540918 FPR3P25089 353 aa8.73□□□□□ -1.01
TTC39C-203ENST00000540918 ABCD3P28288 659 aa8.73□□□□□ -1.01
TTC39C-203ENST00000540918 MSX1P28360 303 aa8.73□□□□□ -1.01
TTC39C-203ENST00000540918 TNFSF8P32971 234 aa8.73□□□□□ -1.01
TTC39C-203ENST00000540918 NR4A2P43354 598 aa8.73□□□□□ -1.01
TTC39C-203ENST00000540918 DCAF7P61962 342 aa8.73□□□□□ -1.01
TTC39C-203ENST00000540918 DUSP8Q13202 625 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms